ggKbase home page

scnpilot_solids2_trim150_scaffold_5326

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5326_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..693
DNA (693bp) protein (231aa)
Dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87280.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5326_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(719..823)
DNA (105bp) protein (35aa)
Amidohydrolase, imidazolonepropionase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH5_9GAMM
amidohydrolase, imidazolonepropionase
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGG87281.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5326_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(769..1860)
DNA (1092bp) protein (364aa)
Amidohydrolase, imidazolonepropionase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHH5_9GAMM rbh
amidohydrolase, imidazolonepropionase rbh
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGG87281.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5326_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1862..2557)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97522.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5326_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2562..3821)
DNA (1260bp) protein (420aa)
Amidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS9_9GAMM rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:AGG87282.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5326_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3871..4419)
DNA (549bp) protein (183aa)
DSBA oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI3_9GAMM rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EIL97524.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein-disulfide isomerase rbh
scnpilot_solids2_trim150_scaffold_5326_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..4931)
DNA (513bp) protein (171aa)
AhpC/TSA family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI4_9GAMM rbh
Peroxiredoxin rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5326_8
unknown

Not on your lists

5080..5361
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5326_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5522..6532
DNA (1011bp) protein (337aa)
signal transduction histidine kinase, nitrogen specific (EC:2.7.13.3) rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Signal transduction histidine kinase, nitrogen specific n=1 Tax=Rhodanobacter denitrificans RepID=I4WUT3_9GAMM rbh
scnpilot_solids2_trim150_scaffold_5326_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6525..7079
DNA (555bp) protein (185aa)
Nitrogen regulation protein NR(I) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN2_9GAMM
nitrogen regulation protein NR(I)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5326_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7163..7882
DNA (720bp) protein (240aa)
Nitrogen regulation protein NR(I) n=1 Tax=Rhodanobacter denitrificans RepID=I4WUT4_9GAMM
nitrogen regulation protein NR(I)
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:AGG87287.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5326_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8025..9359
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA67_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87289.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5326_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9394..10179
DNA (786bp) protein (262aa)
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44)
6-phosphogluconate dehydrogenase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN5_9GAMM
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:EIL97926.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 13 items

View Taxonomy