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scnpilot_solids2_trim150_scaffold_5669

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5669_1
unknown

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3..89
DNA (87bp) protein (29aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5669_2
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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226..1545
DNA (1320bp) protein (440aa)
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting ATPase CopB n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WNE3_9MICO
Copper-transporting ATPase CopB {ECO:0000313|EMBL:GAB95306.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids2_trim150_scaffold_5669_3
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1518..2345
DNA (828bp) protein (276aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:ELQ86272.1}; EC=3.6.3.4 {ECO:0000313|EMBL:ELQ86272.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8F6X7_MYCSM
scnpilot_solids2_trim150_scaffold_5669_4
unknown

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2448..2888
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5669_5
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

2888..3658
DNA (771bp) protein (257aa)
Tax=BJP_IG2102_Coriobacteriales_64_17
scnpilot_solids2_trim150_scaffold_5669_6
unknown

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3655..3777
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5669_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3781..4707)
DNA (927bp) protein (309aa)
Integrase catalytic region n=2 Tax=Microbacterium RepID=H8E5F2_9MICO rbh
Integrase catalytic region {ECO:0000313|EMBL:EIC08091.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
integrase core domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_5669_8
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4704..5018)
DNA (315bp) protein (105aa)
transposase n=1 Tax=Acaricomes phytoseiuli RepID=UPI00037A3F15
transposase IS6110
Transposase IS6110 {ECO:0000313|EMBL:AFC41543.1}; TaxID=487521 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384; / NCTC 13025 / 3600).;"
scnpilot_solids2_trim150_scaffold_5669_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5069..5425
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSS8_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52488.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids2_trim150_scaffold_5669_10
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5499..6566)
DNA (1068bp) protein (356aa)
Membrane protein {ECO:0000313|EMBL:KJC62991.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
Putative uncharacterized protein id=7721119 bin=CNBR_ACT species=unknown genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
scnpilot_solids2_trim150_scaffold_5669_11
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7074..7268)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00036A6D16
Helix-turn-helix domain {ECO:0000313|EMBL:KJE23686.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
excisionase family DNA-binding domain-containing protein
scnpilot_solids2_trim150_scaffold_5669_12
unknown

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7363..7998
DNA (636bp) protein (212aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5669_13
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

7973..9073
DNA (1101bp) protein (367aa)
Putative phage integrase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z1Y5_NOCFA rbh
phage integrase rbh
Tax=BJP_IG2157_Actinomycetales_63_19
scnpilot_solids2_trim150_scaffold_5669_trna_1
unknown

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comp(9089..9161)
DNA (73bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_5669_14
unknown

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comp(9418..9549)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5669_15
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9815..10291)
DNA (477bp) protein (159aa)
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:CCH75892.1}; EC=2.5.1.49 {ECO:0000313|EMBL:CCH75892.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLP4_KRIFD
scnpilot_solids2_trim150_scaffold_5669_16
unknown

Not on your lists

10655..10762
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 17 items

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