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scnpilot_solids2_trim150_scaffold_5717

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5717_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11..226
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=4 Tax=Rhodanobacter RepID=I4WHW5_9GAMM
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5717_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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416..862
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDG3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87468.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5717_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(840..1154)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHW7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87467.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5717_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1304..1474
DNA (171bp) protein (57aa)
UPF0391 membrane protein UUC_16285 n=1 Tax=Rhodanobacter denitrificans RepID=I4WHW8_9GAMM
Protein of unknown function (DUF1328)
UPF0391 membrane protein R2APBS1_0290 {ECO:0000256|HAMAP-Rule:MF_01361}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5717_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1567..3354
DNA (1788bp) protein (596aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA primase (EC:2.7.7.-) rbh
DNA primase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHW9_9GAMM rbh
scnpilot_solids2_trim150_scaffold_5717_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3470..3985
DNA (516bp) protein (172aa)
DedA protein family n=1 Tax=Rhodanobacter denitrificans RepID=I4WHX0_9GAMM
putative membrane-associated protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5717_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3996..5021
DNA (1026bp) protein (342aa)
Sodium/bile acid symporter family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHC0_9GAMM
Sodium/bile acid symporter family protein {ECO:0000313|EMBL:EIL98861.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative Na+-dependent transporter
scnpilot_solids2_trim150_scaffold_5717_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4996..5889)
DNA (894bp) protein (298aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH1_9GAMM rbh
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase rbh
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AGG90699.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5717_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5895..6605)
DNA (711bp) protein (237aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD1_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5717_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6583..7734)
DNA (1152bp) protein (384aa)
3-dehydroquinate synthetase (EC:4.2.3.4) rbh
2-epi-5-epi-valiolone synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKA7_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_5717_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7731..7955)
DNA (225bp) protein (75aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
LuxS protein involved in autoinducer AI2 synthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU1_9GAMM
LuxS protein involved in autoinducer AI2 synthesis
scnpilot_solids2_trim150_scaffold_5717_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8140..9381)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97125.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sugar phosphate isomerase/epimerase rbh
scnpilot_solids2_trim150_scaffold_5717_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9463..10587)
DNA (1125bp) protein (375aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter denitrificans RepID=I4WKA4_9GAMM
cytochrome c, mono- and diheme variants family
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AGG90704.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 13 items

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