ggKbase home page

scnpilot_solids2_trim150_scaffold_5930

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5930_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

335..622
DNA (288bp) protein (96aa)
Histone family protein DNA-binding protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SFU2_GALCS
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_5930_2
unknown

Not on your lists

1180..1287
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_5930_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1578..1967
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BUS1_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34179.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_solids2_trim150_scaffold_5930_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1945..2262
DNA (318bp) protein (106aa)
Predicted transcriptional regulator n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQV5_9GAMM
transcriptional regulator; K07726 putative transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL47197.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_solids2_trim150_scaffold_5930_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2332..2832)
DNA (501bp) protein (167aa)
IncP-type DNA transfer maturation peptidase TraF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG8_9PROT
IncP-type DNA transfer maturation peptidase TraF {ECO:0000313|EMBL:CCU63566.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TraF protein of DNA transfer system
scnpilot_solids2_trim150_scaffold_5930_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2874..3692)
DNA (819bp) protein (273aa)
IncP-type DNA transfer coupling protein TraG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW64_9PROT
IncP-type DNA transfer coupling protein TraG {ECO:0000313|EMBL:CCU63565.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
Displaying 6 items

View Taxonomy