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scnpilot_solids2_trim150_scaffold_10430

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_10430_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3..206)
DNA (204bp) protein (68aa)
xylose isomerase n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003789FF5
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EEF58087.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
scnpilot_solids2_trim150_scaffold_10430_2
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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273..746
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVZ6_LEAB4
Uncharacterized protein {ECO:0000313|EMBL:KEQ30150.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_10430_3
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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820..1656
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZZ6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEQ30149.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_10430_4
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1681..2211
DNA (531bp) protein (177aa)
TonB-denpendent receptor n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B749F8
TonB-dependent receptor {ECO:0000313|EMBL:KGD69041.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
outer membrane receptor (OMR) family transporter; K02014 iron complex outermembrane recepter protein
Displaying 4 items

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