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scnpilot_solids2_trim150_scaffold_10746

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_10746_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1..522
DNA (522bp) protein (174aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJI2_SINAD
DNA-directed RNA polymerase subunit sigma24
DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AGA29544.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_10746_2
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1044..1805)
DNA (762bp) protein (254aa)
UPI0003A3DCBD related cluster n=1 Tax=unknown RepID=UPI0003A3DCBD
Uncharacterized protein {ECO:0000313|EMBL:EXL06740.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
GntR family transcriptional regulator; K05836 GntR family transcriptional regulator, histidine utilization repressor
scnpilot_solids2_trim150_scaffold_10746_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2017..2163
DNA (147bp) protein (49aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
Urocanate hydratase n=2 Tax=Clostridium symbiosum RepID=E7GSP4_CLOSY
Displaying 3 items

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