ggKbase home page

scnpilot_solids2_trim150_scaffold_66

Search features with annotation key words

Displaying items 61-90 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_66_61
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60892..62226)
DNA (1335bp) protein (445aa)
Extracellular solute-binding protein family 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X5_9BRAD rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:EFI50985.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
extracellular solute-binding protein, family 3 rbh
scnpilot_solids2_trim150_scaffold_66_62
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62293..62934)
DNA (642bp) protein (214aa)
UPI0003D01E99 related cluster n=1 Tax=unknown RepID=UPI0003D01E99 rbh
Integrase {ECO:0000313|EMBL:ESZ06399.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
integrase
scnpilot_solids2_trim150_scaffold_66_63
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62921..63127)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KGT77324.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
scnpilot_solids2_trim150_scaffold_66_64
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63131..63610)
DNA (480bp) protein (160aa)
Head portal protein {ECO:0000313|EMBL:KFB08842.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
Phage portal protein, HK97 family id=2895400 bin=GWF1_Rhodobacteraceae_65_7 species=Phaeobacter gallaeciensis genus=Phaeobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
phage portal protein, HK97 family
scnpilot_solids2_trim150_scaffold_66_65
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63703..64302)
DNA (600bp) protein (200aa)
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:KFB08845.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
Putative phage-related protein id=3011863 bin=GWF1_Rhodobacteraceae_65_7 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
putative phage-like protein
scnpilot_solids2_trim150_scaffold_66_66
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64522..65061)
DNA (540bp) protein (180aa)
Tax=GWF1_Sphingomonadales_63_6_curated
scnpilot_solids2_trim150_scaffold_66_67
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65163..65603)
DNA (441bp) protein (147aa)
Terminase {ECO:0000313|EMBL:KFB08851.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
Terminase id=3011853 bin=GWF1_Rhodobacteraceae_65_7 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
phage terminase, large subunit
scnpilot_solids2_trim150_scaffold_66_68
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65600..66403)
DNA (804bp) protein (268aa)
TOPRIM protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSI7_NITWN
Uncharacterized protein {ECO:0000313|EMBL:EYD77113.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_66_69
unknown

Not on your lists

66469..66657
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_66_70
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66879..67340
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50982.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_66_71
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67486..68079
DNA (594bp) protein (198aa)
Electron transport protein SCO1/SenC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X3_9BRAD rbh
BsSco {ECO:0000313|EMBL:CEG09565.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
copper chaperone SCO1/SenC; K07152 rbh
scnpilot_solids2_trim150_scaffold_66_72
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68110..69495)
DNA (1386bp) protein (462aa)
Glycosyl transferase family 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X4_9BRAD rbh
Poly-beta-1,6-N-acetyl-D-glucosamine synthase {ECO:0000313|EMBL:CEG09564.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_66_73
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69532..70101
DNA (570bp) protein (190aa)
Phage integrase n=169 Tax=Brucella RepID=B2S5I6_BRUA1
Integrase {ECO:0000313|EMBL:KGT77325.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
site-specific recombinase, phage integrase family
scnpilot_solids2_trim150_scaffold_66_trna_1
unknown

Not on your lists

comp(70154..70224)
DNA (71bp)
transferRNA Gly
scnpilot_solids2_trim150_scaffold_66_74
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70296..71408)
DNA (1113bp) protein (371aa)
2'-deoxycytidine 5'-triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] rbh
2-deoxycytidine 5-triphosphate deaminase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X1_9BRAD rbh
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:EFI50981.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_66_75
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71652..72854
DNA (1203bp) protein (401aa)
metZ; O-succinylhomoserine sulfhydrylase MetZ (EC:2.5.1.-); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] rbh
O-succinylhomoserine sulfhydrylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6X0_9BRAD rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:CEG09568.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_66_76
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72910..73845)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NN44_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29819.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
lipolytic protein G-D-S-L rbh
scnpilot_solids2_trim150_scaffold_66_77
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73848..74606)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQS1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29820.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_66_78
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74606..75940)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI50977.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative transmembrane protein rbh
scnpilot_solids2_trim150_scaffold_66_79
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76067..76459
DNA (393bp) protein (131aa)
Protein ApaG n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHM0_AFIFE
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
apaG; protein ApaG; K06195 ApaG protein
scnpilot_solids2_trim150_scaffold_66_80
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76481..77461)
DNA (981bp) protein (327aa)
Hsp33 protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W5_9BRAD rbh
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hslO; 33 kDa chaperonin; K04083 molecular chaperone Hsp33 rbh
scnpilot_solids2_trim150_scaffold_66_81
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77547..78470)
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3) rbh
Ornithine carbamoyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W4_9BRAD rbh
scnpilot_solids2_trim150_scaffold_66_82
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78467..79687)
DNA (1221bp) protein (407aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] rbh
Acetylornithine aminotransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W3_9BRAD rbh
scnpilot_solids2_trim150_scaffold_66_83
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80153..80662
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NL42_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29826.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cell cycle regulator protein; K13583 GcrA cell cycle regulator rbh
scnpilot_solids2_trim150_scaffold_66_84
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80758..81462)
DNA (705bp) protein (235aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W1_9BRAD rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EFI50971.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB rbh
scnpilot_solids2_trim150_scaffold_66_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81475..82191)
DNA (717bp) protein (239aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6W0_9BRAD rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
phoU; phosphate transport system protein PhoU; K02039 phosphate transport system protein rbh
scnpilot_solids2_trim150_scaffold_66_86
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82209..83030)
DNA (822bp) protein (274aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
pstB; phosphate import ATP-binding protein PstB (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
Phosphate ABC transporter, ATPase subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6V9_9BRAD rbh
scnpilot_solids2_trim150_scaffold_66_87
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83027..83872)
DNA (846bp) protein (282aa)
Phosphate ABC transporter, permease PstA n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQS9_AFIFE rbh
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:EKS29830.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
pstA; phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_66_88
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83876..84865)
DNA (990bp) protein (330aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6V7_9BRAD rbh
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:CEG09581.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
pstC; phosphate transport system permease PstC; K02037 phosphate transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_66_89
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84957..85967)
DNA (1011bp) protein (337aa)
Phosphate-binding protein PstS n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHM9_AFIFE rbh
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
pstS; phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein rbh
Displaying items 61-90 of 146 in total

View Taxonomy