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scnpilot_solids2_trim150_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_66_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..711
DNA (711bp) protein (237aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X062_9SPHN
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABQ70070.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids2_trim150_scaffold_66_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1265..2485
DNA (1221bp) protein (407aa)
Major facilitator transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JK32_9PROT
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46629.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_66_3
unknown

Not on your lists

3004..3237
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_66_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3526..3684)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3I9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56777.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_66_5
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3681..3977)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1E1_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56778.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_66_6
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3980..4576)
DNA (597bp) protein (199aa)
Cytochrome C oxidase subunit III n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B000_9RHIZ rbh
cytochrome C oxidase subunit III rbh
Cytochrome C oxidase subunit III {ECO:0000313|EMBL:AGK56779.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_66_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4735..5187
DNA (453bp) protein (151aa)
Cytochrome C class I n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9K9_9RHIZ
cytochrome C class I
Cytochrome C class I {ECO:0000313|EMBL:AGK56780.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_66_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5201..6550
DNA (1350bp) protein (450aa)
Nitric-oxide reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3E6_9BRAD rbh
Nitric oxide reductase subunit B {ECO:0000313|EMBL:CEG07028.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
nitric-oxide reductase subunit B rbh
scnpilot_solids2_trim150_scaffold_66_9
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6579..7388
DNA (810bp) protein (270aa)
ATPase AAA n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3J6_9RHIZ rbh
ATPase AAA rbh
ATPase AAA {ECO:0000313|EMBL:AGK56782.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
scnpilot_solids2_trim150_scaffold_66_10
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7394..9301
DNA (1908bp) protein (636aa)
von Willebrand factor A n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B1E5_9RHIZ rbh
von Willebrand factor A {ECO:0000313|EMBL:AGK56783.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
von Willebrand factor A rbh
scnpilot_solids2_trim150_scaffold_66_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9639..10088
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V734_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09502.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_66_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10081..11313
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V733_9BRAD rbh
Inner membrane protein YibH {ECO:0000313|EMBL:CEG09503.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_66_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11353..11568)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V732_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09504.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_66_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11581..11952)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V731_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51041.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_66_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12138..14561)
DNA (2424bp) protein (808aa)
TonB-dependent siderophore receptor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKZ2_AFIFE rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EKS29766.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K02014 iron complex outermembrane recepter protein rbh
scnpilot_solids2_trim150_scaffold_66_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14660..15838)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHH6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29767.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
MFS transporter; K03449 MFS transporter, CP family, cyanate transporter rbh
scnpilot_solids2_trim150_scaffold_66_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15938..16516)
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V728_9BRAD rbh
Putative HTH-type transcriptional regulator YxaF {ECO:0000313|EMBL:CEG09508.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
transcriptional regulator, TetR family
scnpilot_solids2_trim150_scaffold_66_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16549..17013)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V727_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09509.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
response regulator receiver domain-containing protein; K09958 hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_66_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17131..18054
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V726_9BRAD rbh
Putative DMT superfamily transporter inner membrane protein {ECO:0000313|EMBL:CEG09510.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
integral membrane protein rbh
scnpilot_solids2_trim150_scaffold_66_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18103..18825)
DNA (723bp) protein (241aa)
Transcriptional regulator, XRE family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V720_9BRAD rbh
Anaerobic benzoate catabolism transcriptional regulator {ECO:0000313|EMBL:CEG09516.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
DNA-binding protein
scnpilot_solids2_trim150_scaffold_66_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18929..19984
DNA (1056bp) protein (352aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
bioB; biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V716_9BRAD rbh
scnpilot_solids2_trim150_scaffold_66_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20155..21381
DNA (1227bp) protein (409aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hemA; 5-aminolevulinate synthase HemA (EC:2.3.1.37); K00643 5-aminolevulinate synthase [EC:2.3.1.37] rbh
5-aminolevulinate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V715_9BRAD rbh
scnpilot_solids2_trim150_scaffold_66_23
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21855..25430
DNA (3576bp) protein (1192aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V713_9BRAD rbh
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:EFI51023.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Na-dependent permease, histidine kinase rbh
scnpilot_solids2_trim150_scaffold_66_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25409..26083)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V712_9BRAD rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFI51022.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
two component transcriptional regulator, LuxR family rbh
scnpilot_solids2_trim150_scaffold_66_25
unknown

Not on your lists

comp(26127..26360)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_66_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26704..28365
DNA (1662bp) protein (554aa)
General substrate transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V711_9BRAD rbh
Proline porter II {ECO:0000313|EMBL:CEG09526.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
mtbA; hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_66_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28463..29005)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V710_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09527.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_66_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29028..29651)
DNA (624bp) protein (208aa)
DSBA oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V709_9BRAD rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EFI51019.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DSBA oxidoreductase
scnpilot_solids2_trim150_scaffold_66_29
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29837..30298
DNA (462bp) protein (154aa)
FoF1 ATP synthase, subunit I n=2 Tax=Oligotropha carboxidovorans RepID=B6JDD1_OLICO
hypothetical protein; K02116 ATP synthase protein I
Uncharacterized protein {ECO:0000313|EMBL:AEI07925.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_66_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30364..31107
DNA (744bp) protein (248aa)
atpB; ATP synthase subunit a; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] rbh
ATP synthase subunit a n=1 Tax=Afipia sp. 1NLS2 RepID=D6V707_9BRAD rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying items 1-30 of 146 in total

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