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scnpilot_solids2_trim150_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_111_1
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..452
DNA (450bp) protein (150aa)
putative DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E590E1
scnpilot_solids2_trim150_scaffold_111_2
unknown

Not on your lists

497..634
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_111_3
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

637..2358
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E3A21A rbh
putative DNA replication primase rbh
Putative DNA replication primase {ECO:0000313|EMBL:ABS45647.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
scnpilot_solids2_trim150_scaffold_111_4
Moraxella macacae, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2634..3251
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Moraxella macacae 0408225 RepID=L2F500_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ELA08109.1}; TaxID=1230338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella macacae 0408225.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_5

Not on your lists

3254..3493
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000378DF76
Uncharacterized protein {ECO:0000313|EMBL:KKN34565.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_6
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3531..4451)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=U8SCP5_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EGB97794.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..5163)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDI8_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM44313.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids2_trim150_scaffold_111_8
Edwardsiella tarda, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5175..7175)
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E8E82E rbh
TraN rbh
TraN {ECO:0000313|EMBL:ACY86405.1}; TaxID=498217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella tarda (strain EIB202).;"
scnpilot_solids2_trim150_scaffold_111_9
unknown

Not on your lists

comp(7168..7383)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Pseudomonas mendocina RepID=UPI000369B66C
scnpilot_solids2_trim150_scaffold_111_10
unknown

Not on your lists

comp(7394..7663)
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_111_11
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7660..7881)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) RepID=B1JIN5_YERPY
Uncharacterized protein {ECO:0000313|EMBL:KIF02241.1}; TaxID=1571774 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7888..8427)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=R9VH50_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN83391.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
scnpilot_solids2_trim150_scaffold_111_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8444..8917)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036E7B11
Uncharacterized protein {ECO:0000313|EMBL:EQL43555.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_14
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8914..9300)
DNA (387bp) protein (129aa)
Uncharacterized protein n=5 Tax=Pseudomonas syringae pv. actinidiae RepID=S6PHL5_PSESF
Uncharacterized protein {ECO:0000313|EMBL:KAK41849.1}; TaxID=1095103 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. actinidiae ICMP 18884.;"
scnpilot_solids2_trim150_scaffold_111_15
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9373..10353)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002E334F9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS45692.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
scnpilot_solids2_trim150_scaffold_111_16
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10364..13735)
DNA (3372bp) protein (1124aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F9C58 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABO60333.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
scnpilot_solids2_trim150_scaffold_111_17
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13746..13952)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Burkholderia cenocepacia (strain HI2424) RepID=A0B4W7_BURCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIF28115.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
scnpilot_solids2_trim150_scaffold_111_18
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13949..14212)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZLF9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14332.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
scnpilot_solids2_trim150_scaffold_111_19
Serratia phage phiMAM1, Caudovirales, Viruses

Not on your lists

14467..14721
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Serratia phage phiMAM1 RepID=K7Z9Q2_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AFX93593.1}; TaxID=1262513 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Serratia phage phiMAM1.;"
scnpilot_solids2_trim150_scaffold_111_20
unknown

Not on your lists

14737..14937
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_111_21
Serratia phage phiMAM1, Caudovirales, Viruses

Not on your lists

14950..15816
DNA (867bp) protein (289aa)
hypothetical protein id=12553793 bin=BDI species=Xanthomonas axonopodis genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:AFX93561.1}; TaxID=1262513 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Serratia phage phiMAM1.;"
scnpilot_solids2_trim150_scaffold_111_22
unknown

Not on your lists

15813..15995
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_111_23
unknown

Not on your lists

15992..16318
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_111_24
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16315..16953
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI000371E3D4
Uncharacterized protein {ECO:0000313|EMBL:EGH82444.1}; TaxID=629260 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. lachrymans str. M301315.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_25
unknown

Not on your lists

17037..17435
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00037062C2
scnpilot_solids2_trim150_scaffold_111_26

Not on your lists

17606..18490
DNA (885bp) protein (295aa)
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Uncharacterized protein n=2 Tax=root RepID=F2Q691_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ABO36582.1}; TaxID=429581 species="Bacteria; environmental samples.;" source="uncultured bacterium pMCBF6.;"
scnpilot_solids2_trim150_scaffold_111_27

Not on your lists

18487..18948
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CUI9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96730.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_111_28
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18948..19373
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JW85_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO60538.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
scnpilot_solids2_trim150_scaffold_111_29
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19373..20500
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI00035EA62A rbh
putative integrase family protein rbh
Putative integrase family protein {ECO:0000313|EMBL:ABS45724.1}; TaxID=349747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype O:1b (strain IP 31758).;"
scnpilot_solids2_trim150_scaffold_111_30
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20532..21023
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0003761359
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA14251.1}; TaxID=1215087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S12.;"
Displaying items 1-30 of 129 in total

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