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scnpilot_solids2_trim150_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_122_1
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..813
-----------------
DNA (813bp)
protein (271aa)
glucose-6-phosphate dehydrogenase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3E674
F420-dependent glucose-6-phosphate dehydrogenase FGD1 {ECO:0000313|EMBL:EGD40158.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
fdg; 5,10-methylenetetrahydromethanopterin reductase
scnpilot_solids2_trim150_scaffold_122_2

Not on your lists

973..1935
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA027-J17 RepID=UPI0003686AC1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA21585.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
scnpilot_solids2_trim150_scaffold_122_3
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2439..5168
-----------------
DNA (2730bp)
protein (910aa)
Radical SAM domain-containing protein; K11779 FO synthase [EC:2.5.1.-] rbh
Radical SAM domain protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AF60_THECD rbh
Radical SAM protein {ECO:0000313|EMBL:ETK33532.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
scnpilot_solids2_trim150_scaffold_122_4
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5237..6577
-----------------
DNA (1341bp)
protein (447aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B4CDED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI11607.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
scnpilot_solids2_trim150_scaffold_122_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6706..8010
-----------------
DNA (1305bp)
protein (435aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Enolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKR0_NAKMY
scnpilot_solids2_trim150_scaffold_122_6
unknown

Not on your lists

7949..8119
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_122_7
unknown

Not on your lists

8246..8902
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_122_8
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8915..9583
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI00035CEC9E
Uncharacterized protein {ECO:0000313|EMBL:AKH85951.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
class II aldolase/adducin family protein
scnpilot_solids2_trim150_scaffold_122_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(9615..11939)
-----------------
DNA (2325bp)
protein (775aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8T1_SPHTD rbh
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ACZ40224.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids2_trim150_scaffold_122_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(11936..12445)
-----------------
DNA (510bp)
protein (170aa)
oxidoreductase, 2Fe-2S subunit; carbon monoxide dehydrogenase, small subunit CoxS (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000370EF64
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids2_trim150_scaffold_122_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12442..13329)
-----------------
DNA (888bp)
protein (296aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Carbon monoxide dehydrogenase medium chain (COdehydrogenase subunit M) (CO-DH M) id=3837098 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
scnpilot_solids2_trim150_scaffold_122_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13326..15605)
-----------------
DNA (2280bp)
protein (760aa)
Putative aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein id=1794494 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
scnpilot_solids2_trim150_scaffold_122_13
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15602..16084)
-----------------
DNA (483bp)
protein (161aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDT2_9BRAD
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:EIG57938.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
(2Fe-2S)-binding protein
scnpilot_solids2_trim150_scaffold_122_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16077..16895)
-----------------
DNA (819bp)
protein (273aa)
carbon-monoxide dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037C1DE7
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
scnpilot_solids2_trim150_scaffold_122_15
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16892..17467)
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QDT4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG57940.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
carbon monoxide dehydrogenase subunit G
scnpilot_solids2_trim150_scaffold_122_16
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17592..19100
-----------------
DNA (1509bp)
protein (503aa)
Succinate dehydrogenase/fumarate reductase flavoprotein subunit n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X431_9PSEU rbh
Succinate dehydrogenase/fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:EHR53302.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
tricarballylate dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_122_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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19125..20066
-----------------
DNA (942bp)
protein (314aa)
Polysaccharide deacetylase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETX04898.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative hydrolase
scnpilot_solids2_trim150_scaffold_122_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20059..21000
-----------------
DNA (942bp)
protein (314aa)
Polysaccharide deacetylase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJM6_9GAMM
putative hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
scnpilot_solids2_trim150_scaffold_122_19
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20997..21983
-----------------
DNA (987bp)
protein (329aa)
asparaginase (EC:3.5.1.1); K01424 L-asparaginase [EC:3.5.1.1]
L-asparaginase, type II n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5Z4_9PROT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
scnpilot_solids2_trim150_scaffold_122_20
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22012..23676
-----------------
DNA (1665bp)
protein (555aa)
ligase/synthetase (EC:6.2.1.-); K12507 acyl-CoA synthetase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Citreicella sp. SE45 RepID=D0DDU7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS11032.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
scnpilot_solids2_trim150_scaffold_122_21
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23681..24658
-----------------
DNA (978bp)
protein (326aa)
NADPH quinone oxidoreductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Alcohol dehydrogenase, zinc-binding n=1 Tax=Citreicella sp. SE45 RepID=D0DDU5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KJS11030.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
scnpilot_solids2_trim150_scaffold_122_22
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24749..25417
-----------------
DNA (669bp)
protein (223aa)
GntR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B699BE
Uncharacterized protein {ECO:0000313|EMBL:KIC62300.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_122_23
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25906..26583)
-----------------
DNA (678bp)
protein (226aa)
Phthalate ester hydrolase (Isochorismatase hydrolase) n=3 Tax=Rhodococcus RepID=L2TL99_9NOCA
patE; phthalate ester hydrolase (isochorismatase hydrolase)
Phthalate ester hydrolase (Isochorismatase hydrolase) {ECO:0000313|EMBL:ELB91392.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
scnpilot_solids2_trim150_scaffold_122_24
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26882..27718
-----------------
DNA (837bp)
protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11K66_MESSB
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG62209.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_122_25
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27761..28612
-----------------
DNA (852bp)
protein (284aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHZ8_METFS
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:AGB03406.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
scnpilot_solids2_trim150_scaffold_122_26
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28623..29384
-----------------
DNA (762bp)
protein (254aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11K67_MESSB
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABG62208.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_122_27
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29440..30528
-----------------
DNA (1089bp)
protein (363aa)
Putative uncharacterized protein id=2145520 bin=GWD2_Deltaproteobacteria_55_8 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_solids2_trim150_scaffold_122_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30722..31378
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDE1_HYPSM
hypothetical protein; K09967 hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_solids2_trim150_scaffold_122_29
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31612..32772)
-----------------
DNA (1161bp)
protein (387aa)
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal id=2044823 bin=GWD2_Deltaproteobacteria_55_8 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
acyl-CoA dehydrogenase
Tax=GWD2_Deltaproteobacteria_55_8_curated
scnpilot_solids2_trim150_scaffold_122_30
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(32775..33983)
-----------------
DNA (1209bp)
protein (403aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2L3_CONWI rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADB52279.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying items 1-30 of 99 in total

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