name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_151_60
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(60081..60953)
----------------- DNA (873bp) protein (291aa) |
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:EFI51311.1}; EC=2.1.1.80 {ECO:0000313|EMBL:EFI51311.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cheR; chemotaxis protein methyltransferase 1 (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
rbh
MCP methyltransferase, CheR-type n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7V1_9BRAD
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_61
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(60950..62044)
----------------- DNA (1095bp) protein (365aa) |
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cheB; chemotaxis response regulator protein-glutamate methylesterase 1 (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7V0_9BRAD
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_62
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(62177..62542)
----------------- DNA (366bp) protein (122aa) |
Response regulator receiver protein n=2 Tax=Afipia RepID=D6V7U9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09166.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
response regulator receiver domain-containing protein; K03413 two-component system, chemotaxis family, response regulator CheY
|
|
scnpilot_solids2_trim150_scaffold_151_63
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(62575..63045)
----------------- DNA (471bp) protein (157aa) |
CheW protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U8_9BRAD
CheW protein {ECO:0000313|EMBL:EFI51308.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
CheW protein; K03408 purine-binding chemotaxis protein CheW
|
|
scnpilot_solids2_trim150_scaffold_151_64
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(63057..65780)
----------------- DNA (2724bp) protein (908aa) |
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
rbh
CheA signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U7_9BRAD
rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EFI51307.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
scnpilot_solids2_trim150_scaffold_151_65
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(65959..66597)
----------------- DNA (639bp) protein (213aa) |
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U6_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09170.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein; K13588 histidine phosphotransferase ChpT
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_66
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
66749..67588
----------------- DNA (840bp) protein (280aa) |
inositol monophosphatase family protein; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
rbh
Inositol monophosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U5_9BRAD
rbh
Inositol monophosphatase {ECO:0000313|EMBL:EFI51305.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|
|
scnpilot_solids2_trim150_scaffold_151_67
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(67597..68103)
----------------- DNA (507bp) protein (169aa) |
YHS domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U4_9BRAD
YHS domain protein {ECO:0000313|EMBL:EFI51304.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
YHS domain-containing protein
|
|
scnpilot_solids2_trim150_scaffold_151_68
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
68228..68800
----------------- DNA (573bp) protein (191aa) |
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U3_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09173.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_69
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
68920..70077
----------------- DNA (1158bp) protein (386aa) |
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U2_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51302.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_trna_1
unknown
|
Not on your lists |
70175..70246
----------------- DNA (72bp) |
transferRNA Val
|
|
scnpilot_solids2_trim150_scaffold_151_70
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
70406..70978
----------------- DNA (573bp) protein (191aa) |
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U1_9BRAD
rbh
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:CEG09175.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ErfK/YbiS/YcfS/YnhG protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_71
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
70981..71775
----------------- DNA (795bp) protein (265aa) |
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U0_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51300.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_72
unknown
|
Not on your lists |
71882..72388
----------------- DNA (507bp) protein (169aa) |
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_151_73
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
72385..73431
----------------- DNA (1047bp) protein (349aa) |
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hemE; uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
rbh
Uroporphyrinogen decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T7_9BRAD
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_74
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(73428..74432)
----------------- DNA (1005bp) protein (335aa) |
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
rbh
Porphobilinogen deaminase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T6_9BRAD
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_75
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
74550..75704
----------------- DNA (1155bp) protein (385aa) |
hypothetical protein; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
rbh
Glycosyl transferase group 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T5_9BRAD
rbh
Lipopolysaccharide core biosynthesis protein RfaG {ECO:0000313|EMBL:CEG09181.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
scnpilot_solids2_trim150_scaffold_151_76
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
75977..76318
----------------- DNA (342bp) protein (114aa) |
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T4_9BRAD
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EFI51294.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ferredoxin; K05524 ferredoxin
|
|
scnpilot_solids2_trim150_scaffold_151_77
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
76402..77928
----------------- DNA (1527bp) protein (509aa) |
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
fixL; sensor protein FixL (EC:2.7.13.3); K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
rbh
PAS domain S-box protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLL7_AFIFE
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_78
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
77918..78535
----------------- DNA (618bp) protein (206aa) |
Two component transcriptional regulator, LuxR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T2_9BRAD
rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFI51292.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
fixJ; transcriptional regulatory protein FixJ; K14987 two-component system, LuxR family, response regulator FixJ
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_79
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
78580..79005
----------------- DNA (426bp) protein (142aa) |
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T1_9BRAD
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:CEG09185.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
signal receiver domain protein
|
|
scnpilot_solids2_trim150_scaffold_151_80
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
79126..79824
----------------- DNA (699bp) protein (233aa) |
Transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T0_9BRAD
rbh
Nitrogen fixation regulation protein FixK {ECO:0000313|EMBL:CEG09186.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
fixK; nitrogen fixation regulation protein FixK; K15861 CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_81
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(79797..81017)
----------------- DNA (1221bp) protein (407aa) |
NnrS family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S9_9BRAD
rbh
NnrS protein {ECO:0000313|EMBL:CEG09187.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_82
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
81523..83241
----------------- DNA (1719bp) protein (573aa) |
ccoN2; cbb3-type cytochrome oxidase, subunit CcoN; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
rbh
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S8_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09188.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
scnpilot_solids2_trim150_scaffold_151_83
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
83246..83989
----------------- DNA (744bp) protein (248aa) |
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S7_9BRAD
rbh
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:CEG09189.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ccoO2; cbb3-type cytochrome oxidase, subunit CcoO; K00405 cytochrome c oxidase cbb3-type subunit II
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_84
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
83986..84180
----------------- DNA (195bp) protein (65aa) |
ccoQ; cytochrome c oxidase, Cbb3-type, CcoQ subunit (EC:1.9.3.1); K00407 cytochrome c oxidase cbb3-type subunit IV
Cbb3-type cytochrome oxidase component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S6_9BRAD
Cbb3-type cytochrome oxidase, subunit 3 {ECO:0000313|EMBL:CEG09190.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
|
|
scnpilot_solids2_trim150_scaffold_151_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
84187..85068
----------------- DNA (882bp) protein (294aa) |
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S5_9BRAD
rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ccoP2; cbb3-type cytochrome oxidase, subunit CcoP; K00406 cytochrome c oxidase cbb3-type subunit III
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_86
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
85065..85289
----------------- DNA (225bp) protein (75aa) |
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09192.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_151_87
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
85302..86111
----------------- DNA (810bp) protein (270aa) |
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S3_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51283.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative cytochrome c oxidase subunit I
rbh
|
|
scnpilot_solids2_trim150_scaffold_151_88
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
86196..88451
----------------- DNA (2256bp) protein (752aa) |
fixI; nitrogen fixation protein FixI (EC:3.6.3.-)
rbh
Heavy metal translocating P-type ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S2_9BRAD
rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EFI51282.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
|