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scnpilot_solids2_trim150_scaffold_151

Search features with annotation key words

Displaying items 61-90 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_151_60
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60081..60953)
-----------------
DNA (873bp)
protein (291aa)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:EFI51311.1}; EC=2.1.1.80 {ECO:0000313|EMBL:EFI51311.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cheR; chemotaxis protein methyltransferase 1 (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
MCP methyltransferase, CheR-type n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7V1_9BRAD rbh
scnpilot_solids2_trim150_scaffold_151_61
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60950..62044)
-----------------
DNA (1095bp)
protein (365aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cheB; chemotaxis response regulator protein-glutamate methylesterase 1 (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] rbh
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7V0_9BRAD rbh
scnpilot_solids2_trim150_scaffold_151_62
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62177..62542)
-----------------
DNA (366bp)
protein (122aa)
Response regulator receiver protein n=2 Tax=Afipia RepID=D6V7U9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09166.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
response regulator receiver domain-containing protein; K03413 two-component system, chemotaxis family, response regulator CheY
scnpilot_solids2_trim150_scaffold_151_63
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62575..63045)
-----------------
DNA (471bp)
protein (157aa)
CheW protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U8_9BRAD
CheW protein {ECO:0000313|EMBL:EFI51308.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
CheW protein; K03408 purine-binding chemotaxis protein CheW
scnpilot_solids2_trim150_scaffold_151_64
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63057..65780)
-----------------
DNA (2724bp)
protein (908aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] rbh
CheA signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U7_9BRAD rbh
CheA signal transduction histidine kinase {ECO:0000313|EMBL:EFI51307.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_151_65
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65959..66597)
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09170.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein; K13588 histidine phosphotransferase ChpT rbh
scnpilot_solids2_trim150_scaffold_151_66
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66749..67588
-----------------
DNA (840bp)
protein (280aa)
inositol monophosphatase family protein; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] rbh
Inositol monophosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U5_9BRAD rbh
Inositol monophosphatase {ECO:0000313|EMBL:EFI51305.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_151_67
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67597..68103)
-----------------
DNA (507bp)
protein (169aa)
YHS domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U4_9BRAD
YHS domain protein {ECO:0000313|EMBL:EFI51304.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
YHS domain-containing protein
scnpilot_solids2_trim150_scaffold_151_68
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68228..68800
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09173.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_151_69
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68920..70077
-----------------
DNA (1158bp)
protein (386aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51302.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_151_trna_1
unknown

Not on your lists

70175..70246
-----------------
DNA (72bp)
transferRNA Val
scnpilot_solids2_trim150_scaffold_151_70
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70406..70978
-----------------
DNA (573bp)
protein (191aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U1_9BRAD rbh
Putative L,D-transpeptidase ErfK/SrfK {ECO:0000313|EMBL:CEG09175.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ErfK/YbiS/YcfS/YnhG protein rbh
scnpilot_solids2_trim150_scaffold_151_71
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70981..71775
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7U0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51300.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_151_72
unknown

Not on your lists

71882..72388
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_151_73
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72385..73431
-----------------
DNA (1047bp)
protein (349aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hemE; uroporphyrinogen decarboxylase HemE (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] rbh
Uroporphyrinogen decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T7_9BRAD rbh
scnpilot_solids2_trim150_scaffold_151_74
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73428..74432)
-----------------
DNA (1005bp)
protein (335aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] rbh
Porphobilinogen deaminase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T6_9BRAD rbh
scnpilot_solids2_trim150_scaffold_151_75
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74550..75704
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] rbh
Glycosyl transferase group 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T5_9BRAD rbh
Lipopolysaccharide core biosynthesis protein RfaG {ECO:0000313|EMBL:CEG09181.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_151_76
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75977..76318
-----------------
DNA (342bp)
protein (114aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T4_9BRAD
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:EFI51294.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ferredoxin; K05524 ferredoxin
scnpilot_solids2_trim150_scaffold_151_77
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76402..77928
-----------------
DNA (1527bp)
protein (509aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
fixL; sensor protein FixL (EC:2.7.13.3); K14986 two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] rbh
PAS domain S-box protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLL7_AFIFE rbh
scnpilot_solids2_trim150_scaffold_151_78
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77918..78535
-----------------
DNA (618bp)
protein (206aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T2_9BRAD rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFI51292.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
fixJ; transcriptional regulatory protein FixJ; K14987 two-component system, LuxR family, response regulator FixJ rbh
scnpilot_solids2_trim150_scaffold_151_79
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78580..79005
-----------------
DNA (426bp)
protein (142aa)
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T1_9BRAD
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:CEG09185.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
signal receiver domain protein
scnpilot_solids2_trim150_scaffold_151_80
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79126..79824
-----------------
DNA (699bp)
protein (233aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7T0_9BRAD rbh
Nitrogen fixation regulation protein FixK {ECO:0000313|EMBL:CEG09186.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
fixK; nitrogen fixation regulation protein FixK; K15861 CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein rbh
scnpilot_solids2_trim150_scaffold_151_81
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79797..81017)
-----------------
DNA (1221bp)
protein (407aa)
NnrS family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S9_9BRAD rbh
NnrS protein {ECO:0000313|EMBL:CEG09187.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO rbh
scnpilot_solids2_trim150_scaffold_151_82
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81523..83241
-----------------
DNA (1719bp)
protein (573aa)
ccoN2; cbb3-type cytochrome oxidase, subunit CcoN; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] rbh
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09188.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_151_83
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83246..83989
-----------------
DNA (744bp)
protein (248aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S7_9BRAD rbh
Cbb3-type cytochrome c oxidase subunit II {ECO:0000313|EMBL:CEG09189.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ccoO2; cbb3-type cytochrome oxidase, subunit CcoO; K00405 cytochrome c oxidase cbb3-type subunit II rbh
scnpilot_solids2_trim150_scaffold_151_84
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83986..84180
-----------------
DNA (195bp)
protein (65aa)
ccoQ; cytochrome c oxidase, Cbb3-type, CcoQ subunit (EC:1.9.3.1); K00407 cytochrome c oxidase cbb3-type subunit IV
Cbb3-type cytochrome oxidase component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S6_9BRAD
Cbb3-type cytochrome oxidase, subunit 3 {ECO:0000313|EMBL:CEG09190.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
scnpilot_solids2_trim150_scaffold_151_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84187..85068
-----------------
DNA (882bp)
protein (294aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S5_9BRAD rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
ccoP2; cbb3-type cytochrome oxidase, subunit CcoP; K00406 cytochrome c oxidase cbb3-type subunit III rbh
scnpilot_solids2_trim150_scaffold_151_86
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85065..85289
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09192.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_151_87
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85302..86111
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51283.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative cytochrome c oxidase subunit I rbh
scnpilot_solids2_trim150_scaffold_151_88
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86196..88451
-----------------
DNA (2256bp)
protein (752aa)
fixI; nitrogen fixation protein FixI (EC:3.6.3.-) rbh
Heavy metal translocating P-type ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S2_9BRAD rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EFI51282.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying items 61-90 of 100 in total

View Taxonomy