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scnpilot_solids2_trim150_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_152_1
unknown

Not on your lists

1..159
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_152_2
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149..1879)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PAS9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:AJP70999.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_152_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2262..4115
DNA (1854bp) protein (618aa)
glutamate synthase (nadph) (EC:1.4.1.13)
glutamate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D3496
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_152_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4144..5982
DNA (1839bp) protein (613aa)
Putative 2-oxoacid:acceptor oxidoreductase, alpha subunit n=1 Tax=Variovorax paradoxus B4 RepID=T1XLJ9_VARPD
putative 2-oxoacid:acceptor oxidoreductase, alpha subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_solids2_trim150_scaffold_152_5

Not on your lists

5984..7039
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=mine drainage metagenome RepID=T0YFS0_9ZZZZ
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EQD34256.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_solids2_trim150_scaffold_152_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7187..7972
DNA (786bp) protein (262aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX1_9GAMM
3-hydroxybutyrate dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_152_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7975..9144
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87849.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K07001 NTE family protein
scnpilot_solids2_trim150_scaffold_152_8
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9308..10132
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036049E3
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_solids2_trim150_scaffold_152_9
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10113..10970
DNA (858bp) protein (286aa)
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_152_10
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11138..12298
DNA (1161bp) protein (387aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019080}; EC=1.1.-.- {ECO:0000256|HAMAP-Rule:MF_01559, ECO:0000256|SAAS:SAAS00019079};; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
L-lactate dehydrogenase [cytochrome] n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CAK2_ALCDB
L-lactate dehydrogenase
scnpilot_solids2_trim150_scaffold_152_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12520..15708)
DNA (3189bp) protein (1063aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U2_GEMAT rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
scnpilot_solids2_trim150_scaffold_152_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15872..17656)
DNA (1785bp) protein (595aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACX94892.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACX94892.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Gamma-glutamyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVW5_HALNC
scnpilot_solids2_trim150_scaffold_152_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17853..18431)
DNA (579bp) protein (193aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNF8_9GAMM rbh
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EIL88749.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
GPR1/FUN34/yaaH family protein; K07034
scnpilot_solids2_trim150_scaffold_152_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18497..19891)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003795485
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:AGG87792.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_152_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19956..22421)
DNA (2466bp) protein (822aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL9_9GAMM
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:EIL92310.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_152_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22723..24663
DNA (1941bp) protein (647aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNF6_9GAMM rbh
scnpilot_solids2_trim150_scaffold_152_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24754..25443
DNA (690bp) protein (230aa)
LuxR family transcriptional regulator n=1 Tax=Dyella japonica RepID=UPI00030745A0
LuxR family transcriptional regulator {ECO:0000313|EMBL:AIF46351.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids2_trim150_scaffold_152_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25474..28953)
DNA (3480bp) protein (1160aa)
Putative transmembrane two component sensor histidine kinase / response regulator fusion protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ6_9GAMM
Na+/proline symporter {ECO:0000313|EMBL:AGG87200.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Na+/proline symporter
scnpilot_solids2_trim150_scaffold_152_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29271..29918
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97014.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_152_20
unknown

Not on your lists

29915..30025
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_152_21
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30246..30659
DNA (414bp) protein (138aa)
DoxX n=1 Tax=Burkholderia sp. YI23 RepID=G8MJR9_9BURK
Membrane protein {ECO:0000313|EMBL:KDR41728.1}; Putative membrane protein {ECO:0000313|EMBL:CDY78120.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
doxX; DoxX protein; K15977 putative oxidoreductase
scnpilot_solids2_trim150_scaffold_152_22
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30758..31561
DNA (804bp) protein (268aa)
UPI0003CF7945 related cluster n=1 Tax=unknown RepID=UPI0003CF7945 rbh
Agmatinase {ECO:0000313|EMBL:ESY85554.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
agmatinase
scnpilot_solids2_trim150_scaffold_152_23
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31831..32355
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U9Q6_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBA17008.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids2_trim150_scaffold_152_24
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32352..32717
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B405A3
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_152_25
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32880..34295)
DNA (1416bp) protein (472aa)
sodium:proton antiporter n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000364DCD5
Sodium:proton antiporter {ECO:0000313|EMBL:EYT54837.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
dicarboxylate/amino acid:cation symporter rbh
scnpilot_solids2_trim150_scaffold_152_26
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(34813..35934)
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1I3_9BACT
efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACO32196.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
scnpilot_solids2_trim150_scaffold_152_27
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(35931..39188)
DNA (3258bp) protein (1086aa)
Acriflavin resistance protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1I4_9BACT rbh
Gll0876 protein {ECO:0000313|EMBL:BAC88817.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
AcrB/AcrD/AcrF family multidrug efflux protein
scnpilot_solids2_trim150_scaffold_152_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39528..40892
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYY8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92429.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_152_29
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41008..41484
DNA (477bp) protein (159aa)
Ketosteroid isomerase-like enzyme n=1 Tax=Rheinheimera sp. A13L RepID=F7NW32_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
scnpilot_solids2_trim150_scaffold_152_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41546..43120)
DNA (1575bp) protein (525aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9N1_9GAMM
Carboxypeptidase-like protein {ECO:0000313|EMBL:EIL96172.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
carboxypeptidase C (cathepsin A)
Displaying items 1-30 of 111 in total

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