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scnpilot_solids2_trim150_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_167_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41..814
DNA (774bp) protein (258aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA03_9GAMM
biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AGG87195.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_167_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

826..1251
DNA (426bp) protein (142aa)
Biopolymer transport ExbD1 protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL93_9GAMM
Biopolymer transport ExbD1 protein {ECO:0000313|EMBL:EIL87984.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
biopolymer transport protein
scnpilot_solids2_trim150_scaffold_167_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1257..1661
DNA (405bp) protein (135aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUJ3_9GAMM
biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AGG87197.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_167_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2071..3963)
DNA (1893bp) protein (631aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003464BFE
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EIL86786.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids2_trim150_scaffold_167_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4045..4518)
DNA (474bp) protein (158aa)
Phosphohistidine phosphatase SixA n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX7_9GAMM
phosphohistidine phosphatase SixA
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EIL96984.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_167_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..5379)
DNA (636bp) protein (212aa)
ATPase involved in chromosome partitioning n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ01_9GAMM
ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AGG90915.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_167_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5492..6532)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKV3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87844.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_167_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6622..7476)
DNA (855bp) protein (285aa)
spermidine synthase (EC:2.5.1.16)
spermidine synthase n=1 Tax=Dyella japonica RepID=UPI0002E73228
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_167_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7734..9623
DNA (1890bp) protein (630aa)
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTV8_9GAMM
scnpilot_solids2_trim150_scaffold_167_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9637..10389)
DNA (753bp) protein (251aa)
Short-chain alcohol dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ35_9GAMM
short-chain alcohol dehydrogenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_167_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10442..11176)
DNA (735bp) protein (245aa)
Cell division protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMP3_9GAMM
cell division protein
Cell division protein {ECO:0000313|EMBL:AGG90908.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_167_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11176..12840)
DNA (1665bp) protein (555aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW8_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_167_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13261..13932)
DNA (672bp) protein (224aa)
DNA repair protein radc n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKW2_9GAMM
DNA repair protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_167_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14030..15235
DNA (1206bp) protein (402aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
phosphopantothenoylcysteine decarboxylase n=1 Tax=Dyella japonica RepID=UPI0003024012
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:AIF46266.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_167_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15232..15708
DNA (477bp) protein (159aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Dyella japonica RepID=UPI0002EC3527
scnpilot_solids2_trim150_scaffold_167_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15769..18123
DNA (2355bp) protein (785aa)
Phosphomannomutase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMN8_9GAMM
phosphomannomutase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_167_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18155..18802)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL87857.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_167_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18897..19538)
DNA (642bp) protein (214aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Orotate phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM6_9GAMM
orotate phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_167_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19550..20044)
DNA (495bp) protein (165aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLI0_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL88071.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_167_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20081..20848
DNA (768bp) protein (256aa)
Exodeoxyribonuclease III n=1 Tax=Rhodanobacter sp. 115 RepID=I4VLH9_9GAMM rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:EIL88070.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
exodeoxyribonuclease III
scnpilot_solids2_trim150_scaffold_167_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20838..22115
DNA (1278bp) protein (426aa)
Signal transducer n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW0_9GAMM
Signal transducer {ECO:0000313|EMBL:EIL89165.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Major Facilitator Superfamily transporter
scnpilot_solids2_trim150_scaffold_167_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22177..23307)
DNA (1131bp) protein (377aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGV8_9GAMM
molecular chaperone
scnpilot_solids2_trim150_scaffold_167_23
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23315..24532)
DNA (1218bp) protein (406aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM1_9GAMM
metalloendopeptidase-like membrane protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_167_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24897..26108
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPM0_9GAMM
scnpilot_solids2_trim150_scaffold_167_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26154..26837
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89971.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_167_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26802..27563)
DNA (762bp) protein (254aa)
Glutamine amidotransferase {ECO:0000313|EMBL:EIL98238.1}; EC=6.3.5.2 {ECO:0000313|EMBL:EIL98238.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glutamine amidotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFJ7_9GAMM
GMP synthase family protein
scnpilot_solids2_trim150_scaffold_167_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27560..29407)
DNA (1848bp) protein (616aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Rhodanobacter denitrificans RepID=M4NLE4_9GAMM
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:AGG90892.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
scnpilot_solids2_trim150_scaffold_167_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29507..30418
DNA (912bp) protein (304aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycyl-tRNA synthetase alpha chain (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQQ0_9GAMM
scnpilot_solids2_trim150_scaffold_167_29
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30411..32555
DNA (2145bp) protein (715aa)
glycyl-tRNA synthetase beta chain (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_167_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32625..33935
DNA (1311bp) protein (437aa)
Fatty acid permease / acyltransferase fusion protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK3_9GAMM
Fatty acid permease / acyltransferase fusion protein {ECO:0000313|EMBL:EIL98244.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
Displaying items 1-30 of 150 in total

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