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scnpilot_solids2_trim150_scaffold_168

Search features with annotation key words

Displaying items 31-60 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_168_29
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(41220..42206)
DNA (987bp) protein (329aa)
putative threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] rbh
Putative threonine dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9C5_CALAS rbh
Putative threonine dehydratase {ECO:0000313|EMBL:BAM01863.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
scnpilot_solids2_trim150_scaffold_168_30

Not on your lists

comp(42197..42967)
DNA (771bp) protein (257aa)
Aspartate racemase {ECO:0000313|EMBL:AIF15461.1}; EC=5.1.1.13 {ECO:0000313|EMBL:AIF15461.1};; TaxID=1456252 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_70_D07.;"
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
aspartate racemase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037334FD
scnpilot_solids2_trim150_scaffold_168_31
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42964..44538)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000380890E rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ47960.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54-11-8.;"
AMP-dependent synthetase and ligase rbh
scnpilot_solids2_trim150_scaffold_168_32
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44554..46026)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EMR4_9BURK rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_solids2_trim150_scaffold_168_33
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46010..47374)
DNA (1365bp) protein (455aa)
PREDICTED: major facilitator superfamily domain-containing protein 2B-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17C7D
Na+/melibiose symporter-like transporter {ECO:0000313|EMBL:ENZ83964.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
major facilitator superfamily protein
scnpilot_solids2_trim150_scaffold_168_34
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(47371..48807)
DNA (1437bp) protein (479aa)
Beta-lactamase-like protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XCB2_VARPD
Beta-lactamase {ECO:0000313|EMBL:AHG93621.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
beta-lactamase
scnpilot_solids2_trim150_scaffold_168_35
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48804..49334)
DNA (531bp) protein (177aa)
MaoC-like dehydratase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q396V8_BURS3
Uncharacterized protein {ECO:0000313|EMBL:KCZ51942.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
acyl dehydratase MaoC
scnpilot_solids2_trim150_scaffold_168_36
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49334..50221)
DNA (888bp) protein (296aa)
Abortive infection protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T347_CAUSK
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ABZ73869.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids2_trim150_scaffold_168_37
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50209..52428)
DNA (2220bp) protein (740aa)
TonB-dependent receptor n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3KYK6_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EGG30837.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
TonB-dependent receptor rbh
scnpilot_solids2_trim150_scaffold_168_38
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52608..54023
DNA (1416bp) protein (472aa)
Arabinose efflux permease family protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C1L9_9XANT rbh
MFS transporter {ECO:0000313|EMBL:EYR67864.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
MFS transporter rbh
scnpilot_solids2_trim150_scaffold_168_39
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54113..55429
DNA (1317bp) protein (439aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Dipeptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD98_PHEZH
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_168_40
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55543..55896)
DNA (354bp) protein (118aa)
Monovalent cation/proton antiporter subunit MnhG/PhaG n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ1_9GAMM
Monovalent cation/proton antiporter subunit MnhG/PhaG {ECO:0000313|EMBL:EIL91992.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multisubunit potassium/proton antiporter, PhaG subunit
scnpilot_solids2_trim150_scaffold_168_41
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55893..56174)
DNA (282bp) protein (94aa)
Putative monovalent cation/H+ antiporter subunit F n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV46_9GAMM
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:EIM03338.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
multisubunit Na+/H+ antiporter, MnhF subunit
scnpilot_solids2_trim150_scaffold_168_42
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56171..56659)
DNA (489bp) protein (163aa)
Monovalent cation/H+ antiporter subunit E n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV47_9GAMM
Monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:EIM03339.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
multisubunit Na+/H+ antiporter, MnhE subunit
scnpilot_solids2_trim150_scaffold_168_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56656..58266)
DNA (1611bp) protein (537aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXP8_9GAMM
Putative monovalent cation/H+ antiporter subunit D {ECO:0000313|EMBL:EIL91989.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
scnpilot_solids2_trim150_scaffold_168_44
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58263..58604)
DNA (342bp) protein (114aa)
Putative monovalent cation/H+ antiporter subunit C n=1 Tax=Rhodanobacter denitrificans RepID=I4WX08_9GAMM
multisubunit Na+/H+ antiporter, MnhC subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_168_45
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58604..61504)
DNA (2901bp) protein (967aa)
monovalent cation/H+ antiporter subunit A (EC:1.6.5.3); K05559 multicomponent K+:H+ antiporter subunit A
Putative monovalent cation/H+ antiporter subunit A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV50_9GAMM
Putative monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:EIM03342.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_168_46
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61958..63409)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000369B1CF
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
scnpilot_solids2_trim150_scaffold_168_47
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63691..65082
DNA (1392bp) protein (464aa)
Amino acid permease-associated protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ86_9GAMM
Amino acid permease-associated protein {ECO:0000313|EMBL:EIL99527.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amino acid transporter
scnpilot_solids2_trim150_scaffold_168_48

Not on your lists

65191..65478
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CDK9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD80527.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_168_49

Not on your lists

65478..65681
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CFP7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD80528.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_solids2_trim150_scaffold_168_50
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65795..66586
DNA (792bp) protein (264aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK3_9GAMM
ABC-type proline/glycine betaine transport system, ATPase component
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:AGG89562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_168_51
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66583..68064
DNA (1482bp) protein (494aa)
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD93_9GAMM
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_168_52
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68263..69549
DNA (1287bp) protein (429aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIL96987.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIL96987.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Acetyl-CoA acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ6_9GAMM
acetyl-CoA acetyltransferase
scnpilot_solids2_trim150_scaffold_168_53
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69739..70482)
DNA (744bp) protein (248aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUA5_9GAMM
scnpilot_solids2_trim150_scaffold_168_54
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70479..71153)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030E26CF
4-phosphopantetheinyl transferase {ECO:0000313|EMBL:AIF46353.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
phosphopantetheinyl transferase
scnpilot_solids2_trim150_scaffold_168_55
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71395..71664)
DNA (270bp) protein (90aa)
Transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUK1_9GAMM
Transglycosylase associated protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_168_56
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71763..74411)
DNA (2649bp) protein (883aa)
Magnesium-transporting ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHC1_9GAMM
magnesium-translocating P-type ATPase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_168_57
unknown

Not on your lists

comp(74684..74905)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_168_58
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75475..75846)
DNA (372bp) protein (124aa)
Helix-turn-helix protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L124_FRAAD
Helix-turn-helix protein
Helix-turn-helix protein {ECO:0000313|EMBL:AFC87179.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
Displaying items 31-60 of 66 in total

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