name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_168_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1546
|
Amino acid transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQT4_9GAMM
Amino acid permease {ECO:0000313|EMBL:KGI76799.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
amino acid transporter
|
|
scnpilot_solids2_trim150_scaffold_168_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1715..2812)
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NT70_9GAMM
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG90686.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_168_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3083..4981
|
Glycyl aminopeptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBP2_9GAMM
Glycyl aminopeptidase {ECO:0000313|EMBL:EIL96883.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycyl aminopeptidase
|
|
scnpilot_solids2_trim150_scaffold_168_trna_1
unknown
|
Not on your lists |
5211..5284
|
transferRNA Arg
|
|
scnpilot_solids2_trim150_scaffold_168_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5586..5804
|
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6F0_GEOUR
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
|
|
scnpilot_solids2_trim150_scaffold_168_5
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5801..6094
|
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUU5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW21630.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_168_trna_2
unknown
|
Not on your lists |
6160..6232
|
transferRNA Arg
|
|
scnpilot_solids2_trim150_scaffold_168_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6306..6476
|
Transposase IS3/IS911 family protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2C6_THIK1
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ADG31294.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
|
|
scnpilot_solids2_trim150_scaffold_168_7
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6672..7223
|
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TA68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT70768.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
putative DNA-binding protein
|
|
scnpilot_solids2_trim150_scaffold_168_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7238..8209
|
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZGB1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT70767.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
anti-FecI sigma factor FecR
|
|
scnpilot_solids2_trim150_scaffold_168_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8307..11111
|
Outer membrane receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H0K8_9CAUL
rbh
Outer membrane receptor protein {ECO:0000313|EMBL:EJL36320.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
outer membrane receptor (OMR) family protein; K02014 iron complex outermembrane recepter protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_168_10
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11220..11699
|
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2Q7S6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL36322.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
|
|
scnpilot_solids2_trim150_scaffold_168_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11718..13646
|
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACX94892.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACX94892.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Gamma-glutamyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVW5_HALNC
|
|
scnpilot_solids2_trim150_scaffold_168_12
Corynebacterium singulare, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13941..15254
|
alpha-ketoglutarate transporter n=1 Tax=Corynebacterium bovis RepID=UPI0002192A4A
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AJI77716.1}; TaxID=161899 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium singulare.;"
hypothetical protein; K03761 MFS transporter, MHS family, alpha-ketoglutarate permease
|
|
scnpilot_solids2_trim150_scaffold_168_13
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15436..17376)
|
Para-aminobenzoate synthase, aminase component {ECO:0000313|EMBL:BAQ17250.1}; EC=2.6.1.85 {ECO:0000313|EMBL:BAQ17250.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
pabB; para-aminobenzoate synthetase component I protein (EC:4.1.3.-); K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035FB561
|
|
scnpilot_solids2_trim150_scaffold_168_14
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
17622..18530
|
polysaccharide deacetylase n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003815F0D
Putative Chitin deacetylase 1 {ECO:0000313|EMBL:EPH40230.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
polysaccharide deacetylase
rbh
|
|
scnpilot_solids2_trim150_scaffold_168_15
Rhodococcus sp. YK2, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18527..19186
|
Genes for alpha and beta subunits of terminal dioxygenase component, hypothetical protein, hydrolase, extradiol dioxygenase, hypothetical protein, ferredoxin-like protein, hypothetical protein, partial and complete cds n=1 Tax=Rhodococcus sp. YK2 RepID=Q8L175_9NOCA
Genes for alpha and beta subunits of terminal dioxygenase component, hypothetical protein, hydrolase, extradiol dioxygenase, hypothetical protein, ferredoxin-like protein, hypothetical protein, partial ... {ECO:0000313|EMBL:BAC00809.1}; TaxID=169536 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. YK2.;"
nicotinamidase-like amidase
|
|
scnpilot_solids2_trim150_scaffold_168_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19262..21154
|
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Nuclease-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF78_9GAMM
nuclease-like protein
|
|
scnpilot_solids2_trim150_scaffold_168_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21486..22811
|
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EFB7B
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
scnpilot_solids2_trim150_scaffold_168_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22840..23895
|
Asparaginase n=1 Tax=Rhodanobacter denitrificans RepID=M4NNS6_9GAMM
asparaginase
Asparaginase {ECO:0000313|EMBL:AGG89331.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_168_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24218..25366)
|
Peptidase M19, renal dipeptidase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RXY4_9SPHN
rbh
peptidase M19, renal dipeptidase
rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
|
|
scnpilot_solids2_trim150_scaffold_168_20
Pseudomonas sp. GM55, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25744..27105)
|
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=1144333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM55.;"
Probable D-serine dehydratase n=1 Tax=Pseudomonas sp. GM55 RepID=J2SHI0_9PSED
rbh
|
|
scnpilot_solids2_trim150_scaffold_168_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27185..28501)
|
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Xaa-Pro dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T4_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_168_22
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28553..29344)
|
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00030549C7
Peptidase A1 pepsin {ECO:0000313|EMBL:ETK14303.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FH1.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_168_23
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
comp(29356..31083)
|
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DIP2_THETG
rbh
Methylhydantoinase {ECO:0000313|EMBL:AIZ45198.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
|
|
scnpilot_solids2_trim150_scaffold_168_24
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria
|
Not on your lists |
comp(31080..33167)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362D5B1
rbh
5-oxoprolinase {ECO:0000313|EMBL:AIZ45197.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
|
|
scnpilot_solids2_trim150_scaffold_168_25
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33287..35635)
|
TonB-dependent receptor n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KGE9_SHEWM
rbh
TonB-dependent receptor
rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACA88286.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
|
|
scnpilot_solids2_trim150_scaffold_168_26
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(35776..38460)
|
transcriptional regulator n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4BA
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU83612.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
transcriptional regulator, LuxR family protein; K03556 LuxR family transcriptional regulator, maltose regulon positive regulatory protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_168_27
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38715..40046
|
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3X6_9SPHN
rbh
Thiamine permease {ECO:0000313|EMBL:KFI24799.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
cytosine/purines uracil thiamine allantoin permease; K10974 cytosine permease
|
|
scnpilot_solids2_trim150_scaffold_168_28
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(40128..40964)
|
Regulatory protein, TetR n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L1W1_9GAMM
Regulatory protein, TetR {ECO:0000313|EMBL:EGG29639.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
TetR family transcriptional regulator
|