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scnpilot_solids2_trim150_scaffold_197

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_197_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..445
DNA (444bp) protein (148aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6K7_9GAMM
scnpilot_solids2_trim150_scaffold_197_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

647..1099
DNA (453bp) protein (151aa)
Low molecular weight heat shock protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6K9_9GAMM
Low molecular weight heat shock protein {ECO:0000313|EMBL:EIL95100.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
molecular chaperone (small heat shock protein)
scnpilot_solids2_trim150_scaffold_197_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1207..2106
DNA (900bp) protein (300aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP48_9GAMM
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:EIL88989.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
scnpilot_solids2_trim150_scaffold_197_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2161..2526)
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKD1_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator receiver protein {ECO:0000313|EMBL:EIL99922.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_197_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2594..3595)
DNA (1002bp) protein (334aa)
Putative quinone oxidoreductase, YhdH/YhfP family n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM4_9GAMM
putative quinone oxidoreductase, YhdH/YhfP family
Putative quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:AGG88636.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_197_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3608..4204)
DNA (597bp) protein (199aa)
TIGR00730 family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NF54_9GAMM
TIGR00730 family protein
TIGR00730 family protein {ECO:0000313|EMBL:AGG88637.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_197_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4371..5813)
DNA (1443bp) protein (481aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W987_9GAMM
scnpilot_solids2_trim150_scaffold_197_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5924..7141)
DNA (1218bp) protein (406aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (EC:2.3.1.61) rbh
Dihydrolipoamide succinyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP53_9GAMM rbh
scnpilot_solids2_trim150_scaffold_197_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7222..10125)
DNA (2904bp) protein (968aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:EIL95107.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EIL95107.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L6_9GAMM
scnpilot_solids2_trim150_scaffold_197_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10318..11271)
DNA (954bp) protein (318aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKC5_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL99916.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative acyltransferase
scnpilot_solids2_trim150_scaffold_197_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11268..12458)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NF56_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88642.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_197_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12563..13504
DNA (942bp) protein (314aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cysteine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVD3_9GAMM
scnpilot_solids2_trim150_scaffold_197_13
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13679..15124
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AUG2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFL36878.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
amidohydrolase
scnpilot_solids2_trim150_scaffold_197_14
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15121..16470
DNA (1350bp) protein (450aa)
Imidazolonepropionase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCT3_PHEZH
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:GAK33981.1}; Flags: Precursor;; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
imidazolonepropionase
scnpilot_solids2_trim150_scaffold_197_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16560..17042)
DNA (483bp) protein (161aa)
UPF0234 protein UUA_01105 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUA7_9GAMM
UPF0234 protein UUA_01105 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_197_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17210..17929
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W483_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94274.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ion channel
scnpilot_solids2_trim150_scaffold_197_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18057..18278
DNA (222bp) protein (74aa)
Putative addiction module antidote n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC76_9GAMM
Putative addiction module antidote {ECO:0000313|EMBL:EIL97067.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative addiction module antidote
scnpilot_solids2_trim150_scaffold_197_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18287..18715
DNA (429bp) protein (143aa)
Death-on-curing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVZ1_9GAMM
Death-on-curing protein {ECO:0000313|EMBL:EIL91382.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
death-on-curing protein; K07341 death on curing protein
scnpilot_solids2_trim150_scaffold_197_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18826..20193)
DNA (1368bp) protein (456aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9N9_9GAMM
scnpilot_solids2_trim150_scaffold_197_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20346..21728
DNA (1383bp) protein (461aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNI9_9GAMM
scnpilot_solids2_trim150_scaffold_197_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21869..22291)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WD31_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97372.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_197_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22332..23066)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96680.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_197_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23173..23811)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88781.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_197_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23832..24824)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW84_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91475.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_197_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24821..25678)
DNA (858bp) protein (286aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter denitrificans RepID=I4WVC5_9GAMM
ABC-type multidrug transport system, ATPase component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_197_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25675..26070)
DNA (396bp) protein (132aa)
GntR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNJ3_9GAMM
GntR family transcriptional regulator {ECO:0000313|EMBL:EIL88784.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_197_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26073..26411)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WVC3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88658.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_197_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26724..27869
DNA (1146bp) protein (382aa)
Methionine aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW77_9GAMM
Methionine aminotransferase {ECO:0000313|EMBL:EIL91468.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids2_trim150_scaffold_197_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27881..28678
DNA (798bp) protein (266aa)
Putative amidohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW76_9GAMM
Putative amidohydrolase {ECO:0000313|EMBL:EIL91467.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative amidohydrolase
scnpilot_solids2_trim150_scaffold_197_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28735..29079)
DNA (345bp) protein (115aa)
Arsenate reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9B4_9GAMM
glutaredoxin-dependent arsenate reductase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 72 in total

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