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scnpilot_solids2_trim150_scaffold_223

Search features with annotation key words

Displaying items 31-60 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_223_31
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29995..30822
-----------------
DNA (828bp)
protein (276aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
(LSU ribosomal protein L11P)-lysine N-methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003735015
scnpilot_solids2_trim150_scaffold_223_32
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30890..31543
-----------------
DNA (654bp)
protein (218aa)
Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] rbh
Glycerol-3-phosphate acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR59_NIAKG rbh
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KAC
scnpilot_solids2_trim150_scaffold_223_33
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31667..32479
-----------------
DNA (813bp)
protein (271aa)
Peptidase M48 Ste24p n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR58_NIAKG
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AEV98972.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_34
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32711..33175
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E5D20
Uncharacterized protein {ECO:0000313|EMBL:GAO43894.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_223_35
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33195..35135)
-----------------
DNA (1941bp)
protein (647aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR55_NIAKG rbh
scnpilot_solids2_trim150_scaffold_223_36
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(35382..36095)
-----------------
DNA (714bp)
protein (238aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CA396 rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI92210.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_223_37
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(36120..37430)
-----------------
DNA (1311bp)
protein (437aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003656353 rbh
putative dehydrogenase rbh
Probable dehydrogenase {ECO:0000313|EMBL:EAR01458.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
scnpilot_solids2_trim150_scaffold_223_38
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37811..38995
-----------------
DNA (1185bp)
protein (395aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEV97952.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AEV97952.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-CoA acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6U9_NIAKG
scnpilot_solids2_trim150_scaffold_223_39
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39325..39633)
-----------------
DNA (309bp)
protein (103aa)
Rhodanese-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB3_NIAKG
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEV96719.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_40

Not on your lists

comp(39636..40460)
-----------------
DNA (825bp)
protein (275aa)
PASTA domain containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNQ6_9SPHI
PASTA domain protein {ECO:0000313|EMBL:AIA15380.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PASTA domain-containing protein
scnpilot_solids2_trim150_scaffold_223_41

Not on your lists

comp(40506..41492)
-----------------
DNA (987bp)
protein (329aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase n=1 Tax=Segetibacter koreensis RepID=UPI0003811A96
scnpilot_solids2_trim150_scaffold_223_42

Not on your lists

41846..42991
-----------------
DNA (1146bp)
protein (382aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035F84B2
Marine sediment metagenome DNA, contig: S01H1_S37856 {ECO:0000313|EMBL:GAG44181.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_223_43
CG_Bacteroid_02, Bacteroidetes, Bacteria

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42998..44269
-----------------
DNA (1272bp)
protein (424aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B712FC
hypothetical protein
Tax=CG_Bacteroid_02
scnpilot_solids2_trim150_scaffold_223_44

Not on your lists

comp(44325..44798)
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA17725.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative uncharacterized protein id=2106258 bin=GWD2_Bacteroidetes_33_33 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
scnpilot_solids2_trim150_scaffold_223_45
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44897..45244)
-----------------
DNA (348bp)
protein (116aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEF6_CHIPD
Putative 4Fe-4S ferredoxin {ECO:0000313|EMBL:GAO45708.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
4Fe-4S ferredoxin
scnpilot_solids2_trim150_scaffold_223_46
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45340..46338
-----------------
DNA (999bp)
protein (333aa)
Acyl-CoA reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA7_NIAKG
acyl-CoA reductase
Acyl-CoA reductase {ECO:0000313|EMBL:AEV96713.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_47
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

46513..48060
-----------------
DNA (1548bp)
protein (516aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364A3BC
Serine protease {ECO:0000313|EMBL:GAO45706.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
HtrA2 peptidase
scnpilot_solids2_trim150_scaffold_223_48
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48202..48576
-----------------
DNA (375bp)
protein (125aa)
Chaperonin Cpn10 n=1 Tax=Niabella soli DSM 19437 RepID=H1NPX5_9SPHI
Chaperonin {ECO:0000313|EMBL:AHF14893.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chaperonin Cpn10
scnpilot_solids2_trim150_scaffold_223_49
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

48625..49431
-----------------
DNA (807bp)
protein (269aa)
Esterase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC91421.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
esterase
scnpilot_solids2_trim150_scaffold_223_50
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

49565..50431
-----------------
DNA (867bp)
protein (289aa)
GTPase Era n=1 Tax=Niabella aurantiaca RepID=UPI00035D1897
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
GTP-binding protein Era-like-protein; K03595 GTP-binding protein Era
scnpilot_solids2_trim150_scaffold_223_51
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50561..51550
-----------------
DNA (990bp)
protein (330aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Segetibacter koreensis RepID=UPI000374B539
scnpilot_solids2_trim150_scaffold_223_52
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51556..51879)
-----------------
DNA (324bp)
protein (108aa)
UPF0102 protein Niako_0418 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT2_NIAKG
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Niako_0418 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_53
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51995..52567)
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89426.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_223_54
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52647..54788)
-----------------
DNA (2142bp)
protein (714aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E36F1
Carboxyl-terminal protease {ECO:0000313|EMBL:KIC93655.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_223_trna_1
unknown

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comp(54954..55027)
-----------------
DNA (74bp)
transferRNA His
scnpilot_solids2_trim150_scaffold_223_55
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

55266..57905
-----------------
DNA (2640bp)
protein (880aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C69F1
TonB-dependent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_223_56
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58076..59176
-----------------
DNA (1101bp)
protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Niabella soli DSM 19437 RepID=H1NTP7_9SPHI rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
GTP-binding protein YchF; K06942
scnpilot_solids2_trim150_scaffold_223_57
unknown

Not on your lists

comp(59183..59779)
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_223_58
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(59755..60384)
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI0002D402E2
Sco1/SenC family protein; K07152
Sco1/SenC family protein {ECO:0000313|EMBL:ABO66889.1}; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus thermodenitrificans (strain NG80-2).;"
scnpilot_solids2_trim150_scaffold_223_59
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(60432..61925)
-----------------
DNA (1494bp)
protein (498aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1)
Putative cytochrome c oxidase, subunit I n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLJ8_9BACT
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Displaying items 31-60 of 73 in total

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