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scnpilot_solids2_trim150_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_223_1
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

86..1165
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKJ2_9SPHI rbh
glycoside hydrolase family protein rbh
Tax=RBG_13_Bacteroidetes_46_8_curated
scnpilot_solids2_trim150_scaffold_223_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1196..2380
DNA (1185bp) protein (395aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3] rbh
aldose 1-epimerase n=1 Tax=Niabella aurantiaca RepID=UPI000364AD82 rbh
scnpilot_solids2_trim150_scaffold_223_3
unknown

Not on your lists

comp(2543..2746)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_223_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2907..3473
DNA (567bp) protein (189aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI67_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00684.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3476..4579
DNA (1104bp) protein (368aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI68_NIAKG
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:AEW00685.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4633..5532)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003774591
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59413.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_223_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5607..6530
DNA (924bp) protein (308aa)
Putative D-cysteine desulfhydrase (DcyD) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI70_NIAKG
putative D-cysteine desulfhydrase (DcyD)
Putative D-cysteine desulfhydrase (DcyD) {ECO:0000313|EMBL:AEW00687.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6588..7202)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F8CC5
Uncharacterized protein {ECO:0000313|EMBL:AHF17363.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_223_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7242..8441)
DNA (1200bp) protein (400aa)
aspartate transaminase; K00812 aspartate aminotransferase [EC:2.6.1.1]
Aspartate transaminase {ECO:0000313|EMBL:AEV97380.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEV97380.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aspartate transaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF7_NIAKG
scnpilot_solids2_trim150_scaffold_223_10
unknown

Not on your lists

8635..9264
DNA (630bp) protein (210aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_223_11
unknown

Not on your lists

9261..9857
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_223_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10058..13051
DNA (2994bp) protein (998aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C7C56
Preprotein translocase subunit SecD/SecF {ECO:0000313|EMBL:KIC90195.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
protein translocase subunit secD; K12257 SecD/SecF fusion protein rbh
scnpilot_solids2_trim150_scaffold_223_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13146..13427
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGR8_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26347.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_223_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

13414..14205
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037D76C6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_223_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14243..14584)
DNA (342bp) protein (114aa)
iron-sulfur binding protein n=1 Tax=Niabella aurantiaca RepID=UPI00035DD465
Iron-sulfur binding protein {ECO:0000313|EMBL:AHF15069.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_223_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14675..15187
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F4720
Uncharacterized protein {ECO:0000313|EMBL:GAO44305.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_223_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15214..16773
DNA (1560bp) protein (520aa)
methylmalonyl-CoA mutase large subunit; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEV97370.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEV97370.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
methylmalonyl-CoA mutase n=1 Tax=Segetibacter koreensis RepID=UPI00037E6150 rbh
scnpilot_solids2_trim150_scaffold_223_18
unknown

Not on your lists

16786..17226
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_223_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17240..19639)
DNA (2400bp) protein (800aa)
Cell wall hydrolase/autolysin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE94_NIAKG rbh
cell wall hydrolase/autolysin rbh
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AEV97285.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19737..20096)
DNA (360bp) protein (120aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000363669F
transcriptional regulator; K07737 putative transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_223_21
unknown

Not on your lists

comp(20200..21048)
DNA (849bp) protein (283aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_223_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21230..21919
DNA (690bp) protein (230aa)
Phosphonate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR65_NIAKG
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:GAO43885.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
phosphonate-transporting ATPase; K09812 cell division transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_223_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21903..22988)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D964C rbh
putative mannosyltransferase
Putative mannosyltransferase {ECO:0000313|EMBL:AEV98978.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_223_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

23137..24246
DNA (1110bp) protein (370aa)
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11RD4_CYTH3
a-glycosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_223_25
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24260..25555)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein id=4303244 bin=GWF2_Bacteroidetes_33_16 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_solids2_trim150_scaffold_223_26
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25724..26641
DNA (918bp) protein (306aa)
Beta-lactamase class A n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G2B4_ECHVK rbh
beta-lactamase class A rbh
Beta-lactamase class A {ECO:0000313|EMBL:AGA79116.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_solids2_trim150_scaffold_223_27
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(26664..26999)
DNA (336bp) protein (112aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-]
Transcriptional modulator of MazE/toxin, MazF id=2827892 bin=GWF2_Bacteroidetes_43_11 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_223_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(26980..27219)
DNA (240bp) protein (80aa)
Putative uncharacterized protein id=4959708 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
scnpilot_solids2_trim150_scaffold_223_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


27433..27705
DNA (273bp) protein (91aa)
30S ribosomal protein S15 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR62_NIAKG
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
scnpilot_solids2_trim150_scaffold_223_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27786..29942
DNA (2157bp) protein (719aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
polynucleotide phosphorylase n=1 Tax=Segetibacter koreensis RepID=UPI00037B983D
Displaying items 1-30 of 73 in total

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