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scnpilot_solids2_trim150_scaffold_238

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_238_31
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31907..33136)
DNA (1230bp) protein (410aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL8_9GAMM rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL99659.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type antimicrobial peptide transport system, permease component rbh
scnpilot_solids2_trim150_scaffold_238_32
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33146..34453)
DNA (1308bp) protein (436aa)
ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ77_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL99660.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_33
unknown

Not on your lists

comp(34434..34691)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_238_34
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34691..35911)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87826.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_35
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35912..37219)
DNA (1308bp) protein (436aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT6_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_238_36
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37364..38608)
DNA (1245bp) protein (415aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF9_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90150.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38619..39956)
DNA (1338bp) protein (446aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSG0_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90151.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_38
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40173..41429)
DNA (1257bp) protein (419aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKU3_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL87834.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_39
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41524..42840)
DNA (1317bp) protein (439aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKU4_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL87835.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_40
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43005..44237)
DNA (1233bp) protein (411aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM6_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90567.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_41
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44257..45567)
DNA (1311bp) protein (437aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM7_9GAMM
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL90568.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_238_42
unknown

Not on your lists

comp(45601..45690)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_238_43
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45687..47075)
DNA (1389bp) protein (463aa)
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM8_9GAMM
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EIL90569.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
type I secretion outer membrane protein, TolC family
scnpilot_solids2_trim150_scaffold_238_44
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47035..47757)
DNA (723bp) protein (241aa)
Antimicrobial peptide ABC transporter ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTM9_9GAMM
Antimicrobial peptide ABC transporter ATPase {ECO:0000313|EMBL:EIL90570.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type antimicrobial peptide transport system, ATPase component
scnpilot_solids2_trim150_scaffold_238_45
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47885..49156)
DNA (1272bp) protein (424aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ83_9GAMM
RND family efflux transporter, MFP subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_238_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49366..51708)
DNA (2343bp) protein (781aa)
Glutamate carboxypeptidase II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD69_9GAMM
Glutamate carboxypeptidase II {ECO:0000313|EMBL:EIL97410.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative aminopeptidase
scnpilot_solids2_trim150_scaffold_238_47
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51969..52976
DNA (1008bp) protein (336aa)
Zinc-containing alcohol dehydrogenase superfamily protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ91_9GAMM
Zinc-containing alcohol dehydrogenase superfamily protein {ECO:0000313|EMBL:EIL99532.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_238_48
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

53047..54720
DNA (1674bp) protein (558aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022S8_SOLUE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ84022.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
scnpilot_solids2_trim150_scaffold_238_49
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54903..56396)
DNA (1494bp) protein (498aa)
hsdM; Type I restriction-modification system, DNA methyltransferase subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
Putative RNA methylase:N-6 DNA methylase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NRN8_9DELT rbh
DNA methyltransferase {ECO:0000313|EMBL:AIE19057.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
scnpilot_solids2_trim150_scaffold_238_50
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56393..56734)
DNA (342bp) protein (114aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z466_9GAMM
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EIC21152.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
plasmid stabilization system
scnpilot_solids2_trim150_scaffold_238_51
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56727..57032)
DNA (306bp) protein (102aa)
Prevent-host-death family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U9A0_9GAMM
Prevent-host-death family protein {ECO:0000313|EMBL:EGV19358.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
prevent-host-death family protein
scnpilot_solids2_trim150_scaffold_238_52
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57117..57551)
DNA (435bp) protein (145aa)
addiction module antitoxin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031FC6BA
hypothetical protein
Addiction module antitoxin {ECO:0000313|EMBL:KFI20547.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
scnpilot_solids2_trim150_scaffold_238_53
Paracoccus yeei, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57553..57849)
DNA (297bp) protein (99aa)
Toxin-antitoxin system protein n=1 Tax=Paracoccus aestuarii RepID=J7K509_9RHOB
Toxin of toxin-antitoxin system {ECO:0000313|EMBL:AJW30072.1}; TaxID=147645 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus yeei.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_238_54
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57878..59236)
DNA (1359bp) protein (453aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction modification system DNA specificity domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5W4_SPHTD
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
scnpilot_solids2_trim150_scaffold_238_55
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59684..62443)
DNA (2760bp) protein (920aa)
hsdR; Type I site-specific restriction-modification system, restriction subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNK0_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EAT03289.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
scnpilot_solids2_trim150_scaffold_238_56
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62555..64096)
DNA (1542bp) protein (514aa)
multidrug resistance protein B n=1 Tax=Dyella ginsengisoli RepID=UPI00034C905B
Multidrug resistance protein B {ECO:0000313|EMBL:KJV36585.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_solids2_trim150_scaffold_238_57
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64119..64949)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036E662F
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACD26005.1}; Flags: Precursor;; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
scnpilot_solids2_trim150_scaffold_238_58
unknown

Not on your lists

65012..65233
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_238_59
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65318..65845)
DNA (528bp) protein (176aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphatidylglycerophosphatase A-like protein (EC:3.1.3.27)
Phosphatidylglycerophosphatase A n=1 Tax=Rhodanobacter sp. 115 RepID=I4VTN9_9GAMM
scnpilot_solids2_trim150_scaffold_238_60
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65842..66816)
DNA (975bp) protein (325aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Thiamine-monophosphate kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ45_9GAMM
thiamine-phosphate kinase
Displaying items 31-60 of 69 in total

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