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scnpilot_solids2_trim150_scaffold_253

Search features with annotation key words

Displaying items 31-42 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_253_31
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45748..46593
DNA (846bp) protein (282aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W601_DYAFD
xylose isomerase domain-containing protein
Tax=RBG_13_Bacteroidetes_43_22_curated
scnpilot_solids2_trim150_scaffold_253_32
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

46618..47439
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1F8_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL27353.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_253_33
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

47713..49182
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DE55E rbh
Putative sodium-coupled permease {ECO:0000313|EMBL:EPR65492.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
Na+/solute symporter
scnpilot_solids2_trim150_scaffold_253_34
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

49193..50338
DNA (1146bp) protein (382aa)
glucosamine/galactosamine-6-phosphate isomerase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] rbh
Glucosamine/galactosamine-6-phosphate isomerase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IWQ0_CYCMS rbh
Glucosamine/galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:AEL24242.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_253_35
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50486..51532
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D61F3 rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ACU02573.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_253_36
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

51657..52421
DNA (765bp) protein (255aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6); K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] rbh
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AEI48315.1}; EC=3.5.99.6 {ECO:0000313|EMBL:AEI48315.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003696400 rbh
scnpilot_solids2_trim150_scaffold_253_37
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

52456..53976
DNA (1521bp) protein (507aa)
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003743D55 rbh
putative oxidoreductase rbh
Putative oxidoreductase {ECO:0000313|EMBL:ACT95686.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_253_38
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

54092..55144
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003705067
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACU03905.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_253_39
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55148..55897)
DNA (750bp) protein (250aa)
Regulatory protein DeoR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSN8_PEDHD rbh
DeoR family transcripitonal regulator {ECO:0000313|EMBL:ETZ22962.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
regulatory protein DeoR rbh
scnpilot_solids2_trim150_scaffold_253_40
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56586..59753
DNA (3168bp) protein (1056aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E53C1 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AHF14520.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-dependent receptor plug rbh
scnpilot_solids2_trim150_scaffold_253_41
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

59789..61654
DNA (1866bp) protein (622aa)
RagB/SusD domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB0_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17199.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RagB/SusD domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_253_42
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61687..62274
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037BB5BB
Uncharacterized protein {ECO:0000313|EMBL:AHF17200.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying items 31-42 of 42 in total

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