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scnpilot_solids2_trim150_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_262_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1047)
DNA (1047bp) protein (349aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY2_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_262_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1464..2819)
DNA (1356bp) protein (452aa)
Threonine synthase {ECO:0000313|EMBL:EIL97130.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EIL97130.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Threonine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCD9_9GAMM
threonine synthase
scnpilot_solids2_trim150_scaffold_262_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3811)
DNA (996bp) protein (332aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Homoserine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM15_9GAMM
scnpilot_solids2_trim150_scaffold_262_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3808..4971)
DNA (1164bp) protein (388aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQT8_9GAMM
scnpilot_solids2_trim150_scaffold_262_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5339..5872)
DNA (534bp) protein (178aa)
Cytochrome c class I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB2_9GAMM
Cytochrome c class I {ECO:0000313|EMBL:EIL88003.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c5
scnpilot_solids2_trim150_scaffold_262_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6266..7486
DNA (1221bp) protein (407aa)
Membrane fusion protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P0_9GAMM
Membrane fusion protein {ECO:0000313|EMBL:EIL93731.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_262_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7578..10820
DNA (3243bp) protein (1081aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLB0_9GAMM rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EIL88001.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cation/multidrug efflux pump rbh
scnpilot_solids2_trim150_scaffold_262_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10817..13960
DNA (3144bp) protein (1048aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2P2_9GAMM
Acriflavin resistance protein {ECO:0000313|EMBL:EIL93733.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation/multidrug efflux pump
scnpilot_solids2_trim150_scaffold_262_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14357..17437
DNA (3081bp) protein (1027aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QA7_SOLUE rbh
BNR repeat-containing glycosyl hydrolase rbh
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:ABJ88163.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
scnpilot_solids2_trim150_scaffold_262_10
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17559..17888
DNA (330bp) protein (110aa)
N-acetyltransferase GCN5 n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GYB7_XANCT
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELQ10840.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_262_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18082..19287)
DNA (1206bp) protein (402aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLS5_9GAMM
fatty-acid desaturase
Fatty-acid desaturase {ECO:0000313|EMBL:AGG90613.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_262_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19482..20243
DNA (762bp) protein (254aa)
Multidrug ABC transporter ATPase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC9_9GAMM
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EIL89770.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids2_trim150_scaffold_262_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..21025
DNA (786bp) protein (262aa)
ABC transporter permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8S1_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL95862.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_262_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21025..22377
DNA (1353bp) protein (451aa)
ABC-type uncharacterized transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NSZ7_9GAMM
ABC-type uncharacterized transporter
ABC-type uncharacterized transporter {ECO:0000313|EMBL:AGG90616.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_262_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22381..22875
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89773.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_262_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23022..23849
DNA (828bp) protein (276aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRD3_9GAMM
scnpilot_solids2_trim150_scaffold_262_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24216..24989)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR03_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89644.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_262_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25062..25682)
DNA (621bp) protein (207aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM6_9GAMM
scnpilot_solids2_trim150_scaffold_262_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25862..26317
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI16_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL86857.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_262_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26519..28768
DNA (2250bp) protein (750aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI15_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL86856.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_262_21
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28869..29588)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8APT7_PLESH
Uncharacterized protein {ECO:0000313|EMBL:KGI78923.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein; K09797 hypothetical protein
scnpilot_solids2_trim150_scaffold_262_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29753..30517)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47G22_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46209.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
scnpilot_solids2_trim150_scaffold_262_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30942..31463)
DNA (522bp) protein (174aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ52_9GAMM
PEP-CTERM putative exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGG90122.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_262_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31582..33564
DNA (1983bp) protein (661aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA/RNA helicase, superfamily I (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ47_9GAMM
scnpilot_solids2_trim150_scaffold_262_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33685..34716)
DNA (1032bp) protein (344aa)
Putative permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM3_9GAMM
Putative permease {ECO:0000313|EMBL:EIL89344.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative permease
scnpilot_solids2_trim150_scaffold_262_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34831..37407
DNA (2577bp) protein (859aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycerol-3-phosphate acyltransferase (EC:2.3.1.15)
Glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCM0_9GAMM
scnpilot_solids2_trim150_scaffold_262_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37543..38901
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B54FC rbh
Amidohydrolase {ECO:0000313|EMBL:AHX15051.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
amidohydrolase, imidazolonepropionase
scnpilot_solids2_trim150_scaffold_262_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39191..40570
DNA (1380bp) protein (460aa)
Amidohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCL9_9GAMM rbh
Amidohydrolase {ECO:0000313|EMBL:AHX15051.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
amidohydrolase, imidazolonepropionase rbh
scnpilot_solids2_trim150_scaffold_262_29
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40638..41399
DNA (762bp) protein (254aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ57_9GAMM
ubiquinone/menaquinone biosynthesis methyltransferase
scnpilot_solids2_trim150_scaffold_262_30
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41488..41754
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCS1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97262.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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