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scnpilot_solids2_trim150_scaffold_269

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_269_31
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36646..37578
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037333B7 rbh
ABC transporter permease {ECO:0000313|EMBL:KKB07042.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ribose transporter permease RbsC
scnpilot_solids2_trim150_scaffold_269_32
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37625..38785
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NVC0_9RHOB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31455.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
monosaccharide-binding protein
scnpilot_solids2_trim150_scaffold_269_33
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38794..40569
DNA (1776bp) protein (592aa)
GMC oxidoreductase n=3 Tax=Burkholderia cenocepacia RepID=T0EKS2_9BURK rbh
putative oxidoreductase rbh
GMC oxidoreductase {ECO:0000313|EMBL:ERI30707.1}; TaxID=985077 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia BC7.;"
scnpilot_solids2_trim150_scaffold_269_34
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40612..41367
DNA (756bp) protein (252aa)
Putative short-chain type dehydrogenase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13KN3_BURXL rbh
putative short-chain type dehydrogenase rbh
Putative short-chain type dehydrogenase {ECO:0000313|EMBL:ABE35356.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
scnpilot_solids2_trim150_scaffold_269_35
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41377..42477
DNA (1101bp) protein (367aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
Dihydroorotate dehydrogenase n=1 Tax=Rhodovulum sp. PH10 RepID=J6LJ06_9RHOB rbh
scnpilot_solids2_trim150_scaffold_269_36
unknown

Not on your lists

42474..42584
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_269_37
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42767..43996
DNA (1230bp) protein (410aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003738D99 rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDN22304.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_269_38
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43965..44954
DNA (990bp) protein (330aa)
Permease component of ABC-type sugar transporter n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XMT1_9PSEU rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EHR62056.1}; Flags: Precursor;; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
sugar ABC transporter permease rbh
scnpilot_solids2_trim150_scaffold_269_39
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44954..45778
DNA (825bp) protein (275aa)
Sugar ABC transporter permease n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FY37_9PSEU rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EOD64237.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_269_40
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46049..47506
DNA (1458bp) protein (486aa)
cls; cardiolipin synthethase transmembrane protein; K06131 cardiolipin synthase [EC:2.7.8.-] rbh
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase n=1 Tax=Rhizobium sp. CF142 RepID=J2L214_9RHIZ rbh
Cardiolipin synthetase {ECO:0000313|EMBL:EXL09379.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_269_41
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47787..48671)
DNA (885bp) protein (295aa)
2,3-dimethylmalate lyase (EC:4.1.3.32); K03417 methylisocitrate lyase [EC:4.1.3.30] rbh
2,3-dimethylmalate lyase {ECO:0000313|EMBL:ABQ33379.1}; EC=4.1.3.32 {ECO:0000313|EMBL:ABQ33379.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000300A9EA rbh
scnpilot_solids2_trim150_scaffold_269_42
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48790..49770
DNA (981bp) protein (327aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J0U4_9PROT
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein {ECO:0000313|EMBL:EKE76546.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
bacterial periplasmic substrate-binding protein
scnpilot_solids2_trim150_scaffold_269_43
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49793..50620
DNA (828bp) protein (276aa)
ABC transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPU3_9PROT rbh
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:AIB15863.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
ABC transporter rbh
scnpilot_solids2_trim150_scaffold_269_44
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50617..51372
DNA (756bp) protein (252aa)
ABC transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IA66_AZOC5
ABC transporter
ABC transporter {ECO:0000313|EMBL:BAF88468.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_269_45
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51369..52115
DNA (747bp) protein (249aa)
ABC transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2K155_9PROT
Nitrate ABC transporter permease {ECO:0000313|EMBL:AJC18803.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
ABC transporter
scnpilot_solids2_trim150_scaffold_269_46
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52112..52903
DNA (792bp) protein (264aa)
Putative transcriptional regulatory protein, GntR family with an UbiC transcription regulator-associated domain n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRY4_9BRAD
Putative transcriptional regulatory protein, GntR family with an UbiC transcription regulator-associated domain {ECO:0000313|EMBL:CCD84711.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
putative transcriptional regulatory protein, GntR family with an UbiC transcription regulator-associated domain
scnpilot_solids2_trim150_scaffold_269_47
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52900..54312
DNA (1413bp) protein (471aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
isopropylmalate isomerase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036DD85B rbh
scnpilot_solids2_trim150_scaffold_269_48
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54315..54932
DNA (618bp) protein (206aa)
leuD; alpha-IPM isomerase; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
isopropylmalate isomerase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003828946
scnpilot_solids2_trim150_scaffold_269_49
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54925..56052
DNA (1128bp) protein (376aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] rbh
3-isopropylmalate dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRT2_9BRAD rbh
scnpilot_solids2_trim150_scaffold_269_50
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56233..57138)
DNA (906bp) protein (302aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV93_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EIM27885.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
LysR family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_269_51
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57246..58670
DNA (1425bp) protein (475aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV92_9RHIZ rbh
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIM27884.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative FAD/FMN-containing dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_269_52
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58778..59761)
DNA (984bp) protein (328aa)
AraC family transcriptional regulator n=1 Tax=Burkholderia sp. TJI49 RepID=F0G200_9BURK
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIO36558.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_269_53
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59980..60372
DNA (393bp) protein (131aa)
Isochorismatase n=3 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GQF5_9RHIZ
Isochorismatase {ECO:0000313|EMBL:ESX14434.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
hypothetical protein
Displaying items 31-53 of 53 in total

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