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scnpilot_solids2_trim150_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_269_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288..1019)
DNA (732bp) protein (244aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DBU9_BRAJP
transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:KGT81297.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
scnpilot_solids2_trim150_scaffold_269_2
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1079..2473)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T934_ALCXX rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP43185.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_269_3
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2546..4192
DNA (1647bp) protein (549aa)
FAD binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A8X6_9PROT rbh
FAD binding domain protein {ECO:0000313|EMBL:EHL95333.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain protein rbh
scnpilot_solids2_trim150_scaffold_269_4
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4193..5359)
DNA (1167bp) protein (389aa)
peptidase M20; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA611A
Peptidase M20 {ECO:0000313|EMBL:EMS42101.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
scnpilot_solids2_trim150_scaffold_269_5
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5470..7173
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003611AFC rbh
ABC transporter periplasmic protein rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEG34701.1}; Flags: Precursor;; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0.5JP17-16).;"
scnpilot_solids2_trim150_scaffold_269_6
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7200..8213
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B807E rbh
Peptide ABC transporter {ECO:0000313|EMBL:AIZ45194.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
ABC transporter; K02033 peptide/nickel transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_269_7
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8213..9067
DNA (855bp) protein (285aa)
cytochrome C550 n=1 Tax=Kaistia granuli RepID=UPI0003806135 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR51880.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_269_8
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

9064..10050
DNA (987bp) protein (329aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24) rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DIN8_THETG rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:AIZ45195.1}; TaxID=1182571 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
scnpilot_solids2_trim150_scaffold_269_9
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10109..11137
DNA (1029bp) protein (343aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24) rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEG34705.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEG34705.1};; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0.5JP17-16).;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DIN9_THETG rbh
scnpilot_solids2_trim150_scaffold_269_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

11134..13146
DNA (2013bp) protein (671aa)
hydantoinase B/oxoprolinase (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
Hydantoinase B/oxoprolinase n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YB47_KETVW rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
scnpilot_solids2_trim150_scaffold_269_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13277..15460
DNA (2184bp) protein (728aa)
N-methylhydantoinase A {ECO:0000313|EMBL:CDP50895.1}; EC=3.5.2.14 {ECO:0000313|EMBL:CDP50895.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
5-oxoprolinase (EC:3.5.2.14); K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
Hydantoinase/oxoprolinase n=2 Tax=Ketogulonicigenium vulgare RepID=E3F530_KETVY rbh
scnpilot_solids2_trim150_scaffold_269_12
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15474..17162
DNA (1689bp) protein (563aa)
Acetolactate synthase large subunit (EC:2.2.1.6) rbh
Acetolactate synthase large subunit, biosynthetic type 2 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1Z2_ALCXX rbh
Acetolactate synthase {ECO:0000313|EMBL:ETW98409.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
scnpilot_solids2_trim150_scaffold_269_13
unknown

Not on your lists

comp(17562..18350)
DNA (789bp) protein (263aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_269_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18484..18885
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NPN5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44083.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_269_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19013..20134)
DNA (1122bp) protein (374aa)
sugar ABC transporter; K10111 maltose/maltodextrin transport system ATP-binding protein [EC:3.6.3.19] rbh
Sugar ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW3_9RHIZ rbh
Sugar ABC transporter {ECO:0000313|EMBL:EHK57230.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_269_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20134..21216)
DNA (1083bp) protein (361aa)
Oxidoreductase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW2_9RHIZ rbh
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EHK57229.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oxidoreductase domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_269_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21213..22253)
DNA (1041bp) protein (347aa)
Oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW1_9RHIZ rbh
Oxidoreductase {ECO:0000313|EMBL:EHK57228.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_269_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22277..23131)
DNA (855bp) protein (285aa)
Sugar ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW0_9RHIZ rbh
Sugar ABC transporter {ECO:0000313|EMBL:EHK57227.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sugar ABC transporter, permease; K02026 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_269_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23128..24102)
DNA (975bp) protein (325aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPV9_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK57226.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter; K02025 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_269_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24110..25399)
DNA (1290bp) protein (430aa)
Sugar ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPV8_9RHIZ rbh
Sugar ABC transporter {ECO:0000313|EMBL:EHK57225.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
togB; ABC transporter/Periplasmic pectin oligomer binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_269_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25556..26794)
DNA (1239bp) protein (413aa)
Putative oxidoreductase protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPV7_9RHIZ rbh
Putative oxidoreductase protein {ECO:0000313|EMBL:EHK57224.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_269_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26831..27049)
DNA (219bp) protein (73aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V237_9RHIZ
Endonuclease {ECO:0000313|EMBL:KGM31827.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
endonuclease
scnpilot_solids2_trim150_scaffold_269_23
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27058..28245)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM33958.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_269_24
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28245..29420)
DNA (1176bp) protein (392aa)
oxidoreductase n=1 Tax=Rhizobium radiobacter RepID=UPI000367391B rbh
Oxidoreductase {ECO:0000313|EMBL:KJV10518.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
putative oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_269_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29563..30324)
DNA (762bp) protein (254aa)
HTH-type transcriptional regulator RutR n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TXM9_9RHIZ rbh
HTH-type transcriptional regulator RutR {ECO:0000313|EMBL:ENN85169.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator, TetR family
scnpilot_solids2_trim150_scaffold_269_26
unknown

Not on your lists

comp(30579..31229)
DNA (651bp) protein (217aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_269_27
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31233..32546)
DNA (1314bp) protein (438aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Burkholderia bryophila RepID=UPI000375E6A0
Uncharacterized protein {ECO:0000313|EMBL:KIC47211.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_269_28
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32877..34106
DNA (1230bp) protein (410aa)
aldehyde dehydrogenase family protein; K08324 aldehyde dehydrogenase family protein [EC:1.2.1.-] rbh
Aldehyde dehydrogenase family protein n=2 Tax=Burkholderia cenocepacia RepID=B4EDR4_BURCJ rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KFL32188.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
scnpilot_solids2_trim150_scaffold_269_29
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34140..35681
DNA (1542bp) protein (514aa)
monosaccharide ABC transporter ATP-binding protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EB53D
Putative D-ribose ABC transporter ATP-binding protein {ECO:0000313|EMBL:EAQ04242.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
scnpilot_solids2_trim150_scaffold_269_30
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35678..36649
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003827FF2
ABC transporter permease {ECO:0000313|EMBL:KGM31452.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
monosaccharide ABC transporter membrane protein; K10440 ribose transport system permease protein
Displaying items 1-30 of 53 in total

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