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scnpilot_solids2_trim150_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_276_1
unknown

Not on your lists

comp(3..176)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_276_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311..994
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89971.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_276_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(999..1727)
DNA (729bp) protein (243aa)
Glutamine amidotransferase {ECO:0000313|EMBL:EIL89972.1}; EC=6.3.5.2 {ECO:0000313|EMBL:EIL89972.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glutamine amidotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY1_9GAMM rbh
GMP synthase family protein
scnpilot_solids2_trim150_scaffold_276_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1751..3571)
DNA (1821bp) protein (607aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY2_9GAMM rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EIL89973.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB rbh
scnpilot_solids2_trim150_scaffold_276_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3665..4588
DNA (924bp) protein (308aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycyl-tRNA synthetase alpha chain (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY3_9GAMM rbh
scnpilot_solids2_trim150_scaffold_276_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4585..6732
DNA (2148bp) protein (716aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycyl-tRNA synthetase beta chain (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRY4_9GAMM rbh
scnpilot_solids2_trim150_scaffold_276_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6787..7359)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NJ09_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_276_8
unknown

Not on your lists

7423..7557
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_276_9
unknown

Not on your lists

comp(7870..8391)
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_276_10
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8455..11448
DNA (2994bp) protein (998aa)
Putative TonB dependent receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU6_9GAMM
Oar protein {ECO:0000313|EMBL:KGO98358.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
putative TonB dependent receptor protein
scnpilot_solids2_trim150_scaffold_276_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11712..13586
DNA (1875bp) protein (625aa)
Fatty acid permease / acyltransferase fusion protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2G8_9GAMM rbh
Fatty acid permease / acyltransferase fusion protein {ECO:0000313|EMBL:EIL93659.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids2_trim150_scaffold_276_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13596..14465)
DNA (870bp) protein (290aa)
Membrane protein required for beta-lactamase induction n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2G9_9GAMM rbh
Membrane protein required for beta-lactamase induction {ECO:0000313|EMBL:EIL93660.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane protein required for beta-lactamase induction
scnpilot_solids2_trim150_scaffold_276_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14538..15230)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93661.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_276_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15297..16271)
DNA (975bp) protein (325aa)
Zn-finger containing NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H1_9GAMM rbh
Zn-finger containing NTP pyrophosphohydrolase {ECO:0000313|EMBL:EIL93662.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-finger containing NTP pyrophosphohydrolase rbh
scnpilot_solids2_trim150_scaffold_276_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16282..16650)
DNA (369bp) protein (123aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H2_9GAMM
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Iron-sulfur cluster assembly accessory protein
scnpilot_solids2_trim150_scaffold_276_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16697..17134)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93664.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Integral membrane protein CcmA involved in cell shape determination
scnpilot_solids2_trim150_scaffold_276_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17121..17876)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93665.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_276_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17978..18448)
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Bacterioferritin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H5_9GAMM rbh
bacterioferritin
scnpilot_solids2_trim150_scaffold_276_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18581..18778)
DNA (198bp) protein (66aa)
Bacterioferritin-associated ferredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H6_9GAMM
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:EIL93667.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterioferritin-associated ferredoxin
scnpilot_solids2_trim150_scaffold_276_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18868..19425)
DNA (558bp) protein (186aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA pyrophosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2H7_9GAMM rbh
NTP pyrophosphohydrolase
scnpilot_solids2_trim150_scaffold_276_trna_1
unknown

Not on your lists

19605..19678
DNA (74bp)
transferRNA Met
scnpilot_solids2_trim150_scaffold_276_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19844..21070
DNA (1227bp) protein (409aa)
Integrase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL3_9GAMM
Integrase {ECO:0000313|EMBL:EIL98254.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phage integrase
scnpilot_solids2_trim150_scaffold_276_22
unknown

Not on your lists

21084..22028
DNA (945bp) protein (315aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_276_23
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22137..22475
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UDZ3_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEM58187.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris.;"
scnpilot_solids2_trim150_scaffold_276_24
unknown

Not on your lists

22472..22780
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_276_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22777..24231
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DA0E67
Uncharacterized protein {ECO:0000313|EMBL:EIM03324.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_276_26
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24422..25138)
DNA (717bp) protein (239aa)
Putative MobA/MobL family protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2Z5_HERAR
MobA/MobL family protein {ECO:0000313|EMBL:KGW11297.1}; TaxID=1435370 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR4000.;"
plasmid mobilization protein
scnpilot_solids2_trim150_scaffold_276_27
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25412..28495)
DNA (3084bp) protein (1028aa)
Restriction endonuclease, type I, EcoRI, R subunit/type III; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Restriction endonuclease, type I, EcoRI, R subunit/Type III n=3 Tax=Burkholderiales RepID=F4G847_ALIDK
Type I site-specific deoxyribonuclease chain R {ECO:0000313|EMBL:BAP88827.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_solids2_trim150_scaffold_276_28
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28495..29559)
DNA (1065bp) protein (355aa)
Putative DNA-binding protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WI69_VEREI rbh
putative DNA-binding protein rbh
Putative DNA-binding protein {ECO:0000313|EMBL:ABM57326.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
scnpilot_solids2_trim150_scaffold_276_29
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29546..30919)
DNA (1374bp) protein (458aa)
hypothetical protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Type I restriction modification DNA specificity domain protein n=6 Tax=Pseudomonas aeruginosa RepID=T2E5T4_PSEAI rbh
Putative type I restriction enzyme, S subunit {ECO:0000313|EMBL:EAO12961.1}; TaxID=155919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa Dixon.;"
Displaying items 1-30 of 49 in total

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