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scnpilot_solids2_trim150_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_282_1
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(732..1439)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000375B25E
Transposase family protein {ECO:0000313|EMBL:EIG62350.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
tnp; transposase
scnpilot_solids2_trim150_scaffold_282_2
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1641..1949)
DNA (309bp) protein (103aa)
Transposase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K450_AGRVS
Transposase {ECO:0000313|EMBL:EXS68104.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
tnp; transposase
scnpilot_solids2_trim150_scaffold_282_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2342..3526
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NIK5_RHISP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF20930.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
putative IS1595 family protein rbh
scnpilot_solids2_trim150_scaffold_282_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3548..4150)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21BE2_RHOPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD86294.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_282_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4147..4479)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H05_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08779.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids2_trim150_scaffold_282_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5515..6348)
DNA (834bp) protein (278aa)
Cobalamin synthesis protein P47K n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YHW7_9PROT
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:EKM98496.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
cobalamin synthesis protein P47K
scnpilot_solids2_trim150_scaffold_282_7
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6345..6545)
DNA (201bp) protein (67aa)
Amidohydrolase 3 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M806_METRJ
amidohydrolase 3; K07047
Amidohydrolase 3 {ECO:0000313|EMBL:GAN47640.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
scnpilot_solids2_trim150_scaffold_282_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7154..7930)
DNA (777bp) protein (259aa)
Amidohydrolase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZFX1_9PROT
Amidohydrolase {ECO:0000313|EMBL:EKM98495.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
amidohydrolase; K07047
scnpilot_solids2_trim150_scaffold_282_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8305..9015)
DNA (711bp) protein (237aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q2_9BRAD rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI51262.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_282_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9231..10091
DNA (861bp) protein (287aa)
carbon monoxide dehydrogenase medium subunit, coxM-like protein (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q3_9BRAD rbh
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFI51263.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_282_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10088..10597
DNA (510bp) protein (170aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q4_9BRAD rbh
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:EFI51264.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_282_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10594..12969
DNA (2376bp) protein (792aa)
carbon-monoxide dehydrogenase large subunit, coxL-like protein (EC:1.2.99.2); K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q5_9BRAD rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:EFI51265.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_282_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13009..14259
DNA (1251bp) protein (417aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q6_9BRAD rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51266.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_282_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14276..15151
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q7_9BRAD rbh
Inner-membrane translocator {ECO:0000313|EMBL:EFI51267.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative branched-chain amino acid ABC transporter permease protein rbh
scnpilot_solids2_trim150_scaffold_282_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15148..16164
DNA (1017bp) protein (339aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q8_9BRAD rbh
Inner-membrane translocator {ECO:0000313|EMBL:EFI51268.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
branched-chain amino acid ABC transporter permease rbh
scnpilot_solids2_trim150_scaffold_282_16
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16161..16916
DNA (756bp) protein (252aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7Q9_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51269.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_282_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16903..17613
DNA (711bp) protein (237aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R0_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51270.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_282_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17641..18090
DNA (450bp) protein (150aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7R1_9BRAD
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:EFI51271.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_282_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18175..18567
DNA (393bp) protein (131aa)
Putative transposase of ISAli12B, IS5 family subgroup IS427, ORFA n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB80_AZOL4
putative transposase of ISAli12B, IS5 family subgroup IS427, ORFA
Putative transposase of ISAli12B, IS5 family subgroup IS427, ORFA {ECO:0000313|EMBL:CBS91061.1}; Transposase of ISAli12B, IS5 family IS427 group, ORFA {ECO:0000313|EMBL:CBS85814.1}; Transposase of ISAli12B, IS5 family subgroup IS427, ORFA {ECO:0000313|EMBL:CBS88508.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
scnpilot_solids2_trim150_scaffold_282_20
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18564..18929
DNA (366bp) protein (122aa)
Transposase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PP57_9RHIZ
Transposase {ECO:0000313|EMBL:EJT01833.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
transposase
scnpilot_solids2_trim150_scaffold_282_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19781..20560)
DNA (780bp) protein (260aa)
GntR domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V449_9BRAD rbh
GntR domain protein {ECO:0000313|EMBL:EFI52729.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex rbh
scnpilot_solids2_trim150_scaffold_282_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20754..22211
DNA (1458bp) protein (486aa)
glcD1; glycolate oxidase, subunit GlcD (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] rbh
FAD linked oxidase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V448_9BRAD rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:EFI52728.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids2_trim150_scaffold_282_23
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22208..23365
DNA (1158bp) protein (386aa)
FAD linked oxidase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V447_9BRAD rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:EFI52727.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glcE1; glycolate oxidase, subunit GlcE; K11472 glycolate oxidase FAD binding subunit rbh
scnpilot_solids2_trim150_scaffold_282_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23367..24668
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V446_9BRAD rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_282_25
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24829..25755)
DNA (927bp) protein (309aa)
Putative transcriptional regulator, LysR family n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6X1_HERAR rbh
LysR family transcriptional regulator rbh
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:CAL62258.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
scnpilot_solids2_trim150_scaffold_282_26
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25926..27263
DNA (1338bp) protein (446aa)
Putative major facilitator family transporter n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6X0_HERAR rbh
permease rbh
Putative major facilitator family transporter {ECO:0000313|EMBL:CAL62257.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
scnpilot_solids2_trim150_scaffold_282_27
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27374..28681
DNA (1308bp) protein (436aa)
amidase (EC:3.5.1.4); K01426 amidase [EC:3.5.1.4] rbh
Putative amidase {ECO:0000313|EMBL:CAL62256.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CAL62256.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Putative amidase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6W9_HERAR rbh
scnpilot_solids2_trim150_scaffold_282_28
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28728..29696
DNA (969bp) protein (323aa)
4,5-dihydroxyphthalate decarboxylase (EC:4.1.1.55); K04102 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55] rbh
Putative 4,5-dihydroxyphthalate decarboxylase (DHP decarboxylase) {ECO:0000313|EMBL:CAL62255.1}; EC=4.1.1.55 {ECO:0000313|EMBL:CAL62255.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Putative 4,5-dihydroxyphthalate decarboxylase (DHP decarboxylase) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G6W8_HERAR rbh
scnpilot_solids2_trim150_scaffold_282_29
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29978..31066
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V7Z2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51352.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_282_30
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31298..32083)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PV96_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42273.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
LysR family transcriptional regulator rbh
Displaying items 1-30 of 60 in total

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