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scnpilot_solids2_trim150_scaffold_283

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_283_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_283_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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271..3186
DNA (2916bp) protein (972aa)
UvrABC system protein A n=1 Tax=Rhodanobacter denitrificans RepID=M4NFI1_9GAMM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Excinuclease ABC subunit A
scnpilot_solids2_trim150_scaffold_283_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3183..3632
DNA (450bp) protein (150aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W406_9GAMM
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:EIL94197.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative thioesterase
scnpilot_solids2_trim150_scaffold_283_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3712..5181
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB04_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96645.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_283_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5201..5959
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFI5_9GAMM
enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AGG89665.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_283_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6012..6500)
DNA (489bp) protein (163aa)
Acetyltransferase, N-acetylglutamate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB06_9GAMM
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:EIL96647.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_283_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6512..7363)
DNA (852bp) protein (284aa)
Rhodanese-related sulfurtransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPE4_9GAMM
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EIL89085.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
rhodanese-related sulfurtransferase
scnpilot_solids2_trim150_scaffold_283_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..7953)
DNA (594bp) protein (198aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WPR0_9GAMM
MutT/NUDIX family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_283_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8184..8930)
DNA (747bp) protein (249aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W411_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids2_trim150_scaffold_283_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9085..9867
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ11_9GAMM
enoyl-CoA hydratase/carnithine racemase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_283_11

Not on your lists

10110..11216
DNA (1107bp) protein (369aa)
Lipoprotein n=1 Tax=mine drainage metagenome RepID=T0ZH55_9ZZZZ
Lipoprotein {ECO:0000313|EMBL:EQD47596.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_283_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11297..12220)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKG1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87702.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_283_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12241..14058)
DNA (1818bp) protein (606aa)
DNA mismatch repair protein MutL n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKG0_9GAMM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DNA mismatch repair protein MutL
scnpilot_solids2_trim150_scaffold_283_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14209..15669)
DNA (1461bp) protein (487aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD8_9GAMM
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AGG89671.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_283_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15839..16330)
DNA (492bp) protein (164aa)
ADP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W417_9GAMM
ADP-binding protein {ECO:0000313|EMBL:EIL94208.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATPase, YjeE family
scnpilot_solids2_trim150_scaffold_283_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16320..17822)
DNA (1503bp) protein (501aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ16_9GAMM
yjeF-like protein, hydroxyethylthiazole kinase-related protein
YjeF-like protein, hydroxyethylthiazole kinase-related protein {ECO:0000313|EMBL:AGG89673.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_283_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17865..18962
DNA (1098bp) protein (366aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Epoxyqueuosine reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN5_9GAMM
iron-sulfur cluster binding protein, putative
scnpilot_solids2_trim150_scaffold_283_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18978..19364)
DNA (387bp) protein (129aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB16_9GAMM
scnpilot_solids2_trim150_scaffold_283_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19459..20304)
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAN2_9GAMM
scnpilot_solids2_trim150_scaffold_283_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20319..21149)
DNA (831bp) protein (277aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W422_9GAMM
scnpilot_solids2_trim150_scaffold_283_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21195..21674)
DNA (480bp) protein (160aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD1_9GAMM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AGG89678.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_283_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21671..22999)
DNA (1329bp) protein (443aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Poly(A) polymerase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W424_9GAMM
poly(A) polymerase
scnpilot_solids2_trim150_scaffold_283_trna_1
unknown

Not on your lists

23202..23274
DNA (73bp)
transferRNA Glu
scnpilot_solids2_trim150_scaffold_283_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23547..23870
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAM8_9GAMM
Ferredoxin {ECO:0000313|EMBL:GAN45917.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
putative ferredoxin; K05524 ferredoxin
scnpilot_solids2_trim150_scaffold_283_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24156..24734)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB22_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96663.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_283_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24767..25669)
DNA (903bp) protein (301aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB23_9GAMM
scnpilot_solids2_trim150_scaffold_283_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25772..26353
DNA (582bp) protein (194aa)
Glycine cleavage system regulatory protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHV3_9GAMM
glycine cleavage system regulatory protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_283_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26406..26867
DNA (462bp) protein (154aa)
Peroxiredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ25_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG89683.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_283_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27007..28386
DNA (1380bp) protein (460aa)
PhoH family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB26_9GAMM
PhoH family protein {ECO:0000313|EMBL:EIL96667.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PhoH family protein
scnpilot_solids2_trim150_scaffold_283_29

Not on your lists

comp(28459..29187)
DNA (729bp) protein (243aa)
Methyltransferase type 11 {ECO:0000313|EMBL:EQD55849.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD55849.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Methyltransferase type 11 n=1 Tax=mine drainage metagenome RepID=T1BRJ9_9ZZZZ rbh
methylase
Displaying items 1-30 of 75 in total

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