ggKbase home page

scnpilot_solids2_trim150_scaffold_285

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_285_1
unknown

Not on your lists

157..498
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_285_2
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(453..1187)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AGS4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:CDI03523.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
scnpilot_solids2_trim150_scaffold_285_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2673..2975)
DNA (303bp) protein (101aa)
hypothetical protein id=12556436 bin=CNBR_ACIDO species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
scnpilot_solids2_trim150_scaffold_285_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2997..3323)
DNA (327bp) protein (109aa)
UPF0060 membrane protein Sinac_0496 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8I3_SINAD
hypothetical protein
UPF0060 membrane protein Sinac_0496 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_285_5
unknown

Not on your lists

comp(3369..3632)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_285_6
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3707..3961)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T5D5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI44324.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
scnpilot_solids2_trim150_scaffold_285_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3988..5100)
DNA (1113bp) protein (371aa)
Arsenical-resistance protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIB6_SINAD rbh
arsenical-resistance protein rbh
Arsenical-resistance protein {ECO:0000313|EMBL:AGA28558.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_285_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5097..5792)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH20_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28557.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_285_9
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(5815..6810)
DNA (996bp) protein (332aa)
Methyltransferase type 11 n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZ06_ISOPI
type 11 methyltransferase
Tax=CG_PER_01
scnpilot_solids2_trim150_scaffold_285_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6812..7219)
DNA (408bp) protein (136aa)
ArsR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41F7
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGG81903.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Transcriptional repressor smtB
scnpilot_solids2_trim150_scaffold_285_11
unknown

Not on your lists

comp(7317..8711)
DNA (1395bp) protein (465aa)
hypothetical protein
scnpilot_solids2_trim150_scaffold_285_12
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

9594..10505
DNA (912bp) protein (304aa)
partition protein, Par-like n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4453
chromosome segregation ATPase; K03496 chromosome partitioning protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
scnpilot_solids2_trim150_scaffold_285_13
unknown

Not on your lists

10498..11100
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4452
scnpilot_solids2_trim150_scaffold_285_14
unknown

Not on your lists

comp(11284..11622)
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_285_15
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12499..12750
DNA (252bp) protein (84aa)
Addiction module antidote protein, CC2985 family n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V4N5_9CYAN
addiction module antidote protein
Addiction module antidote protein, CC2985 family {ECO:0000313|EMBL:AFZ03038.1}; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
scnpilot_solids2_trim150_scaffold_285_16
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12764..13054
DNA (291bp) protein (97aa)
Plasmid stabilization protein {ECO:0000313|EMBL:KIJ83957.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
Uncharacterized protein id=3662276 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
plasmid stabilization system protein
scnpilot_solids2_trim150_scaffold_285_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13631..13963)
DNA (333bp) protein (111aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRD5_SINAD
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA31537.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_285_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13987..14355)
DNA (369bp) protein (123aa)
hypothetical protein id=14426132 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
scnpilot_solids2_trim150_scaffold_285_19
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

Not on your lists

comp(14588..15496)
DNA (909bp) protein (303aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0XZ32_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB11868.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
scnpilot_solids2_trim150_scaffold_285_20
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15640..16278
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH44331.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
scnpilot_solids2_trim150_scaffold_285_21
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16296..17000
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH44334.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
scnpilot_solids2_trim150_scaffold_285_22
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17002..20130
DNA (3129bp) protein (1043aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHU1_DESK7
Uncharacterized protein {ECO:0000313|EMBL:CDH44333.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_285_23
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20127..21431
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000380C941
hypothetical protein
Putative TolA protein {ECO:0000313|EMBL:AAU92501.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_solids2_trim150_scaffold_285_24
unknown

Not on your lists

21465..21884
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_285_25
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21914..22552
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AUD7_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:CDH44331.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
scnpilot_solids2_trim150_scaffold_285_26
unknown

Not on your lists

22555..23277
DNA (723bp) protein (241aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_285_27
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23289..25685)
DNA (2397bp) protein (799aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AFL85370.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_solids2_trim150_scaffold_285_28
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25702..26388)
DNA (687bp) protein (229aa)
thiol:disulfide interchange protein id=12556459 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AFL85372.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_solids2_trim150_scaffold_285_29
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26385..27059)
DNA (675bp) protein (225aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.n1)
Copper-exporting P-type ATPase A {ECO:0000313|EMBL:AFV12261.1}; EC=3.6.3.54 {ECO:0000313|EMBL:AFV12261.1};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
ActP protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B5917E
scnpilot_solids2_trim150_scaffold_285_30

Not on your lists

comp(27065..27511)
DNA (447bp) protein (149aa)
MerR family transcriptional regulator n=1 Tax=Desulfovibrio longus RepID=UPI0003B2F46A
Uncharacterized protein {ECO:0000313|EMBL:KKM16985.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MerR family transcriptional regulator
Displaying items 1-30 of 55 in total

View Taxonomy