ggKbase home page

scnpilot_solids2_trim150_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_303_1
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2..4684
DNA (4683bp) protein (1561aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F8B0C9
Helicase, C-terminal {ECO:0000313|EMBL:EAQ81510.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_303_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4867..7416)
DNA (2550bp) protein (850aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC62_SINAD rbh
copper/silver-translocating P-type ATPase rbh
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AGA26827.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..8119)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFV6_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS90547.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
scnpilot_solids2_trim150_scaffold_303_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(8480..9958)
DNA (1479bp) protein (493aa)
Protein serine/threonine phosphatase with extracellular sensor n=1 Tax=Marichromatium purpuratum 984 RepID=F9TXP8_MARPU
serine phosphatase
Tax=RBG_13_Acidobacteria_68_16_curated
scnpilot_solids2_trim150_scaffold_303_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10206..10898)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDU1_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26831.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11141..15151)
DNA (4011bp) protein (1337aa)
Putative silver efflux pump n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC68_SINAD
Putative silver efflux pump {ECO:0000313|EMBL:AGA26832.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
silver efflux pump
scnpilot_solids2_trim150_scaffold_303_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15167..16891)
DNA (1725bp) protein (575aa)
Membrane-fusion protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDC3_SINAD
membrane-fusion protein
Membrane-fusion protein {ECO:0000313|EMBL:AGA26833.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_8
unknown

Not on your lists

17214..17573
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17865..19463
DNA (1599bp) protein (533aa)
Outer membrane protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDA6_SINAD
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGA26835.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_10
unknown

Not on your lists

comp(19474..19947)
DNA (474bp) protein (158aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_11
unknown

Not on your lists

20294..20692
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20860..22443
DNA (1584bp) protein (528aa)
RND family efflux transporter, MFP subunit n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC48_SINAD rbh
RND family efflux transporter MFP subunit rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGA26430.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22471..25692
DNA (3222bp) protein (1074aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCR8_SINAD rbh
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGA26431.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
heavy metal efflux pump rbh
scnpilot_solids2_trim150_scaffold_303_14
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25721..26614
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI0003682826 rbh
Uncharacterized protein {ECO:0000313|EMBL:AII54523.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
czcD1; cobalt-zinc-cadmium resistance protein CzcD; K03295 cation efflux system protein, CDF family
scnpilot_solids2_trim150_scaffold_303_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

26791..28422
DNA (1632bp) protein (544aa)
Outer membrane protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQZ1_SINAD
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGA30831.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_16

Not on your lists

28759..29859
DNA (1101bp) protein (367aa)
hypothetical protein id=88932 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE25235.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_303_17
unknown

Not on your lists

comp(29878..30399)
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_18
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(30434..31456)
DNA (1023bp) protein (341aa)
Phage integrase family protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AH84_9PLAN
Phage integrase family protein {ECO:0000313|EMBL:EMB16475.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
int; putative site specific integrase
scnpilot_solids2_trim150_scaffold_303_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31603..32433)
DNA (831bp) protein (277aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D904_SINAD rbh
prepilin-type N-terminal cleavage/methylation domain-containing protein rbh
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA25859.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_303_20
unknown

Not on your lists

comp(32458..32580)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_21
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33352..33993)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB94_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
scnpilot_solids2_trim150_scaffold_303_22
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

34653..36125
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6X0_ISOPI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV64313.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_solids2_trim150_scaffold_303_23
unknown

Not on your lists

36740..37069
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_24
unknown

Not on your lists

comp(37102..37368)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_25
unknown

Not on your lists

comp(37581..37928)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_26
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(37925..38524)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI000379ADCF
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KJH70261.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
Cobyrinic acid ac-diamide synthase
scnpilot_solids2_trim150_scaffold_303_27
unknown

Not on your lists

38759..39028
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_303_28

Not on your lists

39411..39827
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM16985.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Transcriptional regulator, MerR family id=3552008 bin=GWC2_Proteo_65_14_Ab886 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
scnpilot_solids2_trim150_scaffold_303_29
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39832..40104
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G907_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ39817.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_303_30
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(40723..41340)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRS3_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA31695.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying items 1-30 of 43 in total

View Taxonomy