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scnpilot_solids2_trim150_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_308_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..1443)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U29_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_308_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1546..2742)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACV9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88885.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_308_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2813..5116)
DNA (2304bp) protein (768aa)
Glutamate carboxypeptidase II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD69_9GAMM
Glutamate carboxypeptidase II {ECO:0000313|EMBL:EIL97410.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative aminopeptidase
scnpilot_solids2_trim150_scaffold_308_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5221..8160)
DNA (2940bp) protein (980aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM
outer membrane cobalamin receptor protein
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_308_5
unknown

Not on your lists

8293..8559
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_308_6
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(8683..11889)
DNA (3207bp) protein (1069aa)
BNR/Asp-box repeat protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F5I2_ACIC5
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:AIE84516.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
BNR/Asp-box repeat protein
scnpilot_solids2_trim150_scaffold_308_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12086..14518
DNA (2433bp) protein (811aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG41_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL98432.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids2_trim150_scaffold_308_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14603..15250)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03766.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_308_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15459..16091
DNA (633bp) protein (211aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP cyclohydrolase 1 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRG1_9GAMM
GTP cyclohydrolase I
scnpilot_solids2_trim150_scaffold_308_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16321..17031
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NC10_9GAMM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_308_11
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17212..18573)
DNA (1362bp) protein (454aa)
hippurate hydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030C6AAE rbh
Hippurate hydrolase {ECO:0000313|EMBL:EHJ59703.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_solids2_trim150_scaffold_308_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18748..19545)
DNA (798bp) protein (266aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Rhodanobacter denitrificans RepID=M4NCZ5_9GAMM
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGG87308.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_308_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19682..20386)
DNA (705bp) protein (235aa)
6-phosphogluconolactonase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUW1_9GAMM
6-phosphogluconolactonase {ECO:0000313|EMBL:EIL91002.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
6-phosphogluconolactonase
scnpilot_solids2_trim150_scaffold_308_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20989..22890
DNA (1902bp) protein (634aa)
TonB-dependent receptor protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VP77_9GAMM rbh
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL89018.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
TonB-dependent vitamin B12 receptor
scnpilot_solids2_trim150_scaffold_308_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23032..26187
DNA (3156bp) protein (1052aa)
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WER0_9GAMM
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL97951.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation/multidrug efflux pump
scnpilot_solids2_trim150_scaffold_308_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26529..28166
DNA (1638bp) protein (546aa)
peptidase S10 n=1 Tax=Dyella ginsengisoli RepID=UPI0003493454
Peptidase S10 {ECO:0000313|EMBL:AHX15186.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
carboxypeptidase C (cathepsin A)
scnpilot_solids2_trim150_scaffold_308_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28557..28913
DNA (357bp) protein (119aa)
Putative lipoprotein n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3KGL8_PSEPF
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABA73088.1}; Flags: Precursor;; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;"
scnpilot_solids2_trim150_scaffold_308_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28980..31340)
DNA (2361bp) protein (787aa)
Alpha-1,2-mannosidase family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWS8_9GAMM
Sugar hydrolase {ECO:0000313|EMBL:KGI78424.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
alpha-1,2-mannosidase, putative
scnpilot_solids2_trim150_scaffold_308_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31531..32781
DNA (1251bp) protein (417aa)
Glucose/galactose transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRR1_9GAMM rbh
Glucose/galactose transporter {ECO:0000313|EMBL:EIL89902.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose/galactose transporter; K02429 MFS transporter, FHS family, L-fucose permease
scnpilot_solids2_trim150_scaffold_308_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32778..33758
DNA (981bp) protein (327aa)
sugar kinase; K00847 fructokinase [EC:2.7.1.4]
Sugar kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRR0_9GAMM
Sugar kinase {ECO:0000313|EMBL:EIL89901.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_308_21
Xanthomonas sp. Nyagatare, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33766..34971
DNA (1206bp) protein (402aa)
N-acylglucosamine 2-epimerase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A3A33C rbh
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:KGK56775.1}; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sp. Nyagatare.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_308_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

34968..36401
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A5CEF rbh
Mannosyl-oligosaccharide 1,2-alpha-mannosidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_308_23
unknown

Not on your lists

comp(36503..36733)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_308_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36833..38836)
DNA (2004bp) protein (668aa)
X-Pro dipeptidyl-peptidase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L1_9GAMM
Glutaryl-7-ACA acylase {ECO:0000313|EMBL:KGI78371.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
X-Pro dipeptidyl-peptidase domain-containing protein
scnpilot_solids2_trim150_scaffold_308_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39033..39608
DNA (576bp) protein (192aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU5_9GAMM
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:EIL90986.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Lipid A 3-O-deacylase (PagL)
scnpilot_solids2_trim150_scaffold_308_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39639..41204)
DNA (1566bp) protein (522aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU6_9GAMM
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL92134.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_solids2_trim150_scaffold_308_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41325..42557)
DNA (1233bp) protein (411aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU7_9GAMM
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL90988.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multidrug resistance efflux pump
scnpilot_solids2_trim150_scaffold_308_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42566..44014)
DNA (1449bp) protein (483aa)
NodT family efflux transporter outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY45_9GAMM
NodT family efflux transporter outer membrane lipoprotein {ECO:0000313|EMBL:EIL92136.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_solids2_trim150_scaffold_308_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44035..44493)
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEU8_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL97989.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_308_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44695..45252
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92140.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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