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scnpilot_solids2_trim150_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_316_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3313
DNA (3312bp) protein (1104aa)
Chromosome partition protein Smc n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWM0_9GAMM rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chromosome segregation protein SMC
scnpilot_solids2_trim150_scaffold_316_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3321..4313
DNA (993bp) protein (331aa)
Cell division protein ZipA homolog n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL9_9GAMM rbh
Cell division protein ZipA homolog {ECO:0000256|HAMAP-Rule:MF_00509, ECO:0000256|SAAS:SAAS00054614}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cell division protein ZipA
scnpilot_solids2_trim150_scaffold_316_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4320..4829)
DNA (510bp) protein (170aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL8_9GAMM rbh
methionine-S-sulfoxide reductase
scnpilot_solids2_trim150_scaffold_316_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4826..5275)
DNA (450bp) protein (150aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methionine sulfoxide reductase B (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL7_9GAMM rbh
scnpilot_solids2_trim150_scaffold_316_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5553..7817)
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91607.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
beta-glucosidase-like glycosyl hydrolase
scnpilot_solids2_trim150_scaffold_316_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7858..8277)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91606.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_316_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8470..11838)
DNA (3369bp) protein (1123aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL4_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL91605.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor rbh
scnpilot_solids2_trim150_scaffold_316_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12096..13109
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL3_9GAMM rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL91604.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_316_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13168..14466
DNA (1299bp) protein (433aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL2_9GAMM rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL91603.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
major facilitator superfamily protein rbh
scnpilot_solids2_trim150_scaffold_316_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14608..28950
DNA (14343bp) protein (4781aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003471C16 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR66322.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
membrane protein of unknown function rbh
scnpilot_solids2_trim150_scaffold_316_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28950..29423
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Vibrio vulnificus (strain CMCP6) RepID=Q8D6V6_VIBVU
Uncharacterized protein {ECO:0000313|EMBL:KGF80492.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_316_12
unknown

Not on your lists

30210..31631
DNA (1422bp) protein (474aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_316_13
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31716..32111)
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR70194.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids2_trim150_scaffold_316_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32559..33692
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037E551C
Uncharacterized protein {ECO:0000313|EMBL:EYR70195.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_316_15
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33696..33959
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003476369
Bacterial export s, 3 family protein {ECO:0000313|EMBL:CCF70071.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
flagellar biosynthetic protein; K02420 flagellar biosynthetic protein FliQ
scnpilot_solids2_trim150_scaffold_316_16
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33962..34732
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A8CD3
UDP kinase {ECO:0000313|EMBL:KER81723.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
flagellar biosynthetic protein; K02421 flagellar biosynthetic protein FliR
scnpilot_solids2_trim150_scaffold_316_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34735..35805
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003485647 rbh
FlhB {ECO:0000313|EMBL:EYR70198.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar biosynthetic protein; K02401 flagellar biosynthetic protein FlhB
scnpilot_solids2_trim150_scaffold_316_18
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35802..37871
DNA (2070bp) protein (690aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348ED34 rbh
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EYR70199.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA rbh
scnpilot_solids2_trim150_scaffold_316_19
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37879..38556
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036C8DA2
Flagellar hook-basal body protein {ECO:0000313|EMBL:EYR70200.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar basal-body rod protein; K02392 flagellar basal-body rod protein FlgG
scnpilot_solids2_trim150_scaffold_316_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38566..39333
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A06A4 rbh
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:EYR70201.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar basal-body rod protein; K02392 flagellar basal-body rod protein FlgG
scnpilot_solids2_trim150_scaffold_316_21
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39339..40049
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00035D8255
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative flagellar protein FlgA precursor
scnpilot_solids2_trim150_scaffold_316_22
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40126..40632
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034600F0
Flagellar L-ring protein {ECO:0000313|EMBL:EWC49960.1}; TaxID=1401257 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. glycines str. 8ra.;"
flagellar L-ring protein 1; K02393 flagellar L-ring protein precursor FlgH
scnpilot_solids2_trim150_scaffold_316_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40629..41744
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B5910 rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar P-ring protein; K02394 flagellar P-ring protein precursor FlgI rbh
scnpilot_solids2_trim150_scaffold_316_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41755..42126
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR70415.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids2_trim150_scaffold_316_25
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42129..42545
DNA (417bp) protein (139aa)
Flagellar basal body rod protein n=1 Tax=Pseudomonas sp. GM48 RepID=J3G5R0_9PSED
Flagellar basal-body rod protein FlgC {ECO:0000313|EMBL:EYR70204.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar basal-body rod protein flgC; K02388 flagellar basal-body rod protein FlgC
scnpilot_solids2_trim150_scaffold_316_26
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42542..42844
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A0DEA
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar hook-basal body complex protein fliE; K02408 flagellar hook-basal body complex protein FliE
scnpilot_solids2_trim150_scaffold_316_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42967..44379
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CFD80 rbh
Flagellar M-ring protein FliF {ECO:0000313|EMBL:EYR70206.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
flagellar M-ring protein; K02409 flagellar M-ring protein FliF
scnpilot_solids2_trim150_scaffold_316_28
unknown

Not on your lists

44445..44828
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_316_29
unknown

Not on your lists

44825..45463
DNA (639bp) protein (213aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_316_30
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45460..46794
DNA (1335bp) protein (445aa)
FliI/YscN family ATPase (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14] rbh
ATP synthase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002F09D07 rbh
ATP synthase {ECO:0000313|EMBL:EYR70207.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Displaying items 1-30 of 37 in total

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