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scnpilot_solids2_trim150_scaffold_320

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_320_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..829
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036B664C
MFS transporter {ECO:0000313|EMBL:KGM31129.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative permease of the Major Facilitator Superfamily
scnpilot_solids2_trim150_scaffold_320_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1004..1912
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000363D2CE rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:KEC77597.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
glycine cleavage system transcriptional activator GcvA rbh
scnpilot_solids2_trim150_scaffold_320_3
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1934..2413)
DNA (480bp) protein (160aa)
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VKQ9_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EJZ19461.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_320_4
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2543..2974
DNA (432bp) protein (144aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. Pop5 RepID=K0VPD5_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJZ19460.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_320_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3396
DNA (375bp) protein (125aa)
Transposase IS3/IS911 family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7V3_OCHA4
transposase IS3/IS911 family protein; K07483 transposase
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABS17307.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_320_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3393..4373
DNA (981bp) protein (327aa)
Helix-turn-helix, Fis-type n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXT7_9RHIZ rbh
Helix-turn-helix, Fis-type {ECO:0000313|EMBL:EYR79379.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Fis family transcriptional regulator
scnpilot_solids2_trim150_scaffold_320_7
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4627..5700
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037D741B rbh
Amine oxidase {ECO:0000313|EMBL:KEC78244.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
amine oxidase protein
scnpilot_solids2_trim150_scaffold_320_8
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5720..6760
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037F23F3
Alcohol dehydrogenase {ECO:0000313|EMBL:KEC78245.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
putative Zn-dependent alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_320_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6747..7424
DNA (678bp) protein (226aa)
Anti-sigma factor n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IL62_RHIML
Anti-sigma factor
Uncharacterized protein {ECO:0000313|EMBL:AEH81087.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
scnpilot_solids2_trim150_scaffold_320_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7440..8684
DNA (1245bp) protein (415aa)
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:CDX17458.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CDX17458.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
patB; Cystathionine beta-lyase PatB (EC:4.4.1.8) rbh
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037824C9 rbh
scnpilot_solids2_trim150_scaffold_320_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8831..9361)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A6B943
Uncharacterized protein {ECO:0000313|EMBL:KDR87098.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
ErfK/YbiS/YcfS/YnhG family protein
scnpilot_solids2_trim150_scaffold_320_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9774..10784
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P941_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ33033.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_320_13
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10843..11481)
DNA (639bp) protein (213aa)
RhtB family transporter n=2 Tax=Rhodobacter sphaeroides RepID=Q3J098_RHOS4
RhtB family transporter
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA79786.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
scnpilot_solids2_trim150_scaffold_320_14
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11516..12235)
DNA (720bp) protein (240aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X404_OCHA4 rbh
ErfK/YbiS/YcfS/YnhG family protein rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ABS15958.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_320_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12344..13303
DNA (960bp) protein (320aa)
Esterase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1P2_BREDI
Esterase family protein {ECO:0000313|EMBL:EGF94284.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
esterase; K07017
scnpilot_solids2_trim150_scaffold_320_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13370..13900
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQ59_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31241.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Thiol:disulfide interchange protein-like protein
scnpilot_solids2_trim150_scaffold_320_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14001..15341
DNA (1341bp) protein (447aa)
alcohol dehydrogenase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003AA9033 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:EZQ14231.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
gluconate 2-dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_320_18
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15338..16249
DNA (912bp) protein (304aa)
Cytochrome c class I n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JK49_9RHIZ rbh
Cytochrome c class I {ECO:0000313|EMBL:ELT46687.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
cytochrome c class I rbh
scnpilot_solids2_trim150_scaffold_320_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16687..17598)
DNA (912bp) protein (304aa)
rhizopine catabolism protein modC; K03335 inosose dehydratase [EC:4.2.1.44] rbh
endonuclease n=1 Tax=Rhizobium mongolense RepID=UPI0003B776E0 rbh
IolE protein {ECO:0000313|EMBL:EPR23226.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
scnpilot_solids2_trim150_scaffold_320_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17657..18046)
DNA (390bp) protein (130aa)
4-oxalocrotonate tautomerase (EC:5.3.2.-)
tautomerase n=1 Tax=Rhizobium mongolense RepID=UPI0003B3B2A3
Tautomerase enzyme {ECO:0000313|EMBL:EJB07057.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
scnpilot_solids2_trim150_scaffold_320_21
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18090..18896)
DNA (807bp) protein (269aa)
Uncharacterized enzyme involved in inositol metabolism, IolB n=1 Tax=Roseobacter sp. MED193 RepID=A3X4A9_9RHOB rbh
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:KIC08974.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-M1.;"
iolB1; 5-deoxy-glucuronate isomerase IolC rbh
scnpilot_solids2_trim150_scaffold_320_22
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18908..20749)
DNA (1842bp) protein (614aa)
iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC:3.7.1.-) rbh
pyruvate decarboxylase n=1 Tax=Rhizobium mongolense RepID=UPI0003B62A37 rbh
Acetolactate synthase {ECO:0000313|EMBL:EJN06005.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
scnpilot_solids2_trim150_scaffold_320_23
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20751..22745)
DNA (1995bp) protein (665aa)
ribokinase-like domain-containing protein; K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] rbh
5-dehydro-2-deoxygluconokinase n=1 Tax=Rhizobium mongolense RepID=UPI0003B5313F rbh
Uncharacterized protein {ECO:0000313|EMBL:EJB07054.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
scnpilot_solids2_trim150_scaffold_320_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22693..23700)
DNA (1008bp) protein (336aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
iolG1; Inositol 2-dehydrogenase (EC:1.1.1.18) rbh
Inositol 2-dehydrogenase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BJM4_RHIRD rbh
scnpilot_solids2_trim150_scaffold_320_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23791..24810)
DNA (1020bp) protein (340aa)
inositol 2-dehydrogenase (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18] rbh
dehydrogenase n=1 Tax=Rhizobium mongolense RepID=UPI0003B7B874 rbh
Dehydrogenase {ECO:0000313|EMBL:EPR23392.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
scnpilot_solids2_trim150_scaffold_320_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24833..25627)
DNA (795bp) protein (265aa)
xylose isomerase; K01816 hydroxypyruvate isomerase [EC:5.3.1.22] rbh
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hydroxypyruvate isomerase n=1 Tax=Rhizobium mongolense RepID=UPI0003B5D5CE rbh
scnpilot_solids2_trim150_scaffold_320_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25711..26499)
DNA (789bp) protein (263aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter ATP-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B357C7 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EPR23394.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
scnpilot_solids2_trim150_scaffold_320_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26499..27620)
DNA (1122bp) protein (374aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K02057 simple sugar transport system permease protein rbh
ATPase n=1 Tax=Rhizobium mongolense RepID=UPI0003B382AC rbh
ATPase {ECO:0000313|EMBL:KDR88123.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
scnpilot_solids2_trim150_scaffold_320_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27743..28696)
DNA (954bp) protein (318aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B36CDD rbh
periplasmic binding protein/LacI transcriptional regulator; K02058 simple sugar transport system substrate-binding protein rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ACI58088.1}; Flags: Precursor;; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
scnpilot_solids2_trim150_scaffold_320_30
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28876..29871
DNA (996bp) protein (332aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B6B7CC rbh
LacI family transcription regulator; K02529 LacI family transcriptional regulator rbh
Probable transcriptional regulator protein, LacI family {ECO:0000313|EMBL:ABC91142.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
Displaying items 1-30 of 46 in total

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