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scnpilot_solids2_trim150_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_329_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..558)
DNA (558bp) protein (186aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W469_9GAMM
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EIL94260.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_329_trna_1
unknown

Not on your lists

704..777
DNA (74bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_329_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(828..2387)
DNA (1560bp) protein (520aa)
UPF0061 protein UU7_04657 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W470_9GAMM rbh
UPF0061 protein UU7_04657 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_329_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2470..3594)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W471_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94262.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transglycosylase family protein
scnpilot_solids2_trim150_scaffold_329_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3794..4384
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W472_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94263.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_329_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4431..4775
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W473_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94264.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Fe-S oxidoreductase
scnpilot_solids2_trim150_scaffold_329_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4779..5480)
DNA (702bp) protein (234aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pseudouridine synthase family protein (EC:5.4.99.-) rbh
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W474_9GAMM rbh
scnpilot_solids2_trim150_scaffold_329_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5477..6547)
DNA (1071bp) protein (357aa)
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W475_9GAMM rbh
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EIL94266.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
16S RNA G1207 methylase RsmC
scnpilot_solids2_trim150_scaffold_329_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6627..8627)
DNA (2001bp) protein (667aa)
Oligopeptide transporter, OPT family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W476_9GAMM rbh
Oligopeptide transporter, OPT family protein {ECO:0000313|EMBL:EIL94267.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative oligopeptide transporter, OPT family rbh
scnpilot_solids2_trim150_scaffold_329_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8688..9617)
DNA (930bp) protein (310aa)
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W477_9GAMM rbh
Pseudouridine synthase {ECO:0000313|EMBL:EIL94268.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
23S RNA-specific pseudouridylate synthase rbh
scnpilot_solids2_trim150_scaffold_329_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9682..10239
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W478_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94269.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_329_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10379..10813
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W479_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids2_trim150_scaffold_329_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10864..11721)
DNA (858bp) protein (286aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W480_9GAMM rbh
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:EIL94271.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
serine/threonine protein kinase involved in cell cycle control
scnpilot_solids2_trim150_scaffold_329_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11783..12778)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W481_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94272.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
luciferase family oxidoreductase, group 1
scnpilot_solids2_trim150_scaffold_329_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12901..13623
DNA (723bp) protein (241aa)
Pseudouridylate synthase, 16S rRNA uridine-516 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W482_9GAMM rbh
Pseudouridylate synthase, 16S rRNA uridine-516 {ECO:0000313|EMBL:EIL94273.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pseudouridylate synthase, 16S rRNA uridine-516 rbh
scnpilot_solids2_trim150_scaffold_329_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13701..13805
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_329_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13882..14595)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W483_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94274.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Ion channel
scnpilot_solids2_trim150_scaffold_329_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14685..17126)
DNA (2442bp) protein (814aa)
Peptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W484_9GAMM rbh
Peptidase {ECO:0000313|EMBL:EIL94275.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_329_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17269..17739)
DNA (471bp) protein (157aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W485_9GAMM rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EIL94276.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative acyltransferase
scnpilot_solids2_trim150_scaffold_329_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17743..18513)
DNA (771bp) protein (257aa)
dimethylargininase (EC:3.5.3.18); K01482 dimethylargininase [EC:3.5.3.18]
Dimethylargininase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W486_9GAMM rbh
Dimethylargininase {ECO:0000313|EMBL:EIL94277.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_329_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18809..19606)
DNA (798bp) protein (266aa)
Putative methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W488_9GAMM rbh
Putative methyltransferase {ECO:0000313|EMBL:EIL94279.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_329_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19785..22547
DNA (2763bp) protein (921aa)
Putative lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W489_9GAMM rbh
Putative lipoprotein {ECO:0000313|EMBL:EIL94280.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zinc carboxypeptidase rbh
scnpilot_solids2_trim150_scaffold_329_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22683..24503)
DNA (1821bp) protein (607aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W490_9GAMM rbh
Diguanylate cyclase {ECO:0000313|EMBL:EIL94281.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_329_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24507..24842)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W491_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94282.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_329_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25053..25862)
DNA (810bp) protein (270aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/porphyrin) methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W492_9GAMM rbh
Uroporphyrin-III C/tetrapyrrole (Corrin/porphyrin) methyltransferase {ECO:0000313|EMBL:EIL94283.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
precorrin-3B methylase
scnpilot_solids2_trim150_scaffold_329_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26106..26702)
DNA (597bp) protein (199aa)
2'-5' RNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD83_9GAMM
2'-5' RNA ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_329_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26721..27638)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W493_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94284.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3014)
scnpilot_solids2_trim150_scaffold_329_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27772..28533)
DNA (762bp) protein (254aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W494_9GAMM rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_329_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28530..29462)
DNA (933bp) protein (311aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W495_9GAMM rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIL94286.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids2_trim150_scaffold_329_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29607..30827
DNA (1221bp) protein (407aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W496_9GAMM rbh
Putative oxidoreductase {ECO:0000313|EMBL:EIL94287.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative oxidoreductase rbh
Displaying items 1-30 of 52 in total

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