name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_339_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
120..3083
|
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycine dehydrogenase, decarboxylating (EC:1.4.4.2)
rbh
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR5_9GAMM
rbh
|
|
scnpilot_solids2_trim150_scaffold_339_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3168..4241)
|
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Alanine racemase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLU5_9GAMM
rbh
alanine racemase
rbh
|
|
scnpilot_solids2_trim150_scaffold_339_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4241..5599)
|
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
D-amino acid dehydrogenase small subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIT5_9GAMM
rbh
glycine/D-amino acid oxidase, deaminating
|
|
scnpilot_solids2_trim150_scaffold_339_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5679..6191
|
Putative leucine-responsive regulatory protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC1_9GAMM
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGM52792.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_339_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6275..7567)
|
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPC0_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_339_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7741..8610)
|
Protein HflC n=1 Tax=Rhodanobacter denitrificans RepID=M4ND89_9GAMM
membrane protease subunit, stomatin/prohibitin
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_339_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8607..9689)
|
Integral membrane protease subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPB7_9GAMM
Integral membrane protease subunit {ECO:0000313|EMBL:EIL89058.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
HflK protein
|
|
scnpilot_solids2_trim150_scaffold_339_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9867..11036)
|
GTPase HflX n=1 Tax=Rhodanobacter denitrificans RepID=I4WV77_9GAMM
GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_339_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11224..11484)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000319763A
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
RNA-binding protein Hfq
|
|
scnpilot_solids2_trim150_scaffold_339_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11643..12560)
|
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B3
tRNA dimethylallyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW36_9GAMM
tRNA isopentenyltransferase MiaA
|
|
scnpilot_solids2_trim150_scaffold_339_11
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12727..13761
|
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTK3_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_339_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13883..15085
|
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTK5_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_339_13
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15095..15793)
|
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW41_9GAMM
pseudouridine synthase family protein
|
|
scnpilot_solids2_trim150_scaffold_339_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15949..17118)
|
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV2_9GAMM
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:EIL99393.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
|
|
scnpilot_solids2_trim150_scaffold_339_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17474..18925)
|
2-methylcitrate dehydratase {ECO:0000313|EMBL:EIL99394.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EIL99394.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV3_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_339_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19204..19902
|
Membrane protein TerC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP94_9GAMM
Membrane protein TerC {ECO:0000313|EMBL:EIL89035.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
integral membrane protein, YjbE family
|
|
scnpilot_solids2_trim150_scaffold_339_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20048..20656
|
Putative glutathione S-transferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W2R4_9GAMM
Putative glutathione S-transferase {ECO:0000313|EMBL:EIL93755.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
gst; glutathione S-transferase
|
|
scnpilot_solids2_trim150_scaffold_339_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20678..21829)
|
Citrate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV5_9GAMM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-methylcitrate synthase/citrate synthase II
|
|
scnpilot_solids2_trim150_scaffold_339_19
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21890..22780)
|
2-methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase n=1 Tax=Burkholderia sp. TJI49 RepID=F0FYK1_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
|
|
scnpilot_solids2_trim150_scaffold_339_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22955..24274
|
Na+/H+ dicarboxylate symporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NGB1_9GAMM
Na+/H+ dicarboxylate symporter
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:AGG88688.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_339_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24437..25000
|
Peroxiredoxin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG4_9GAMM
Peroxiredoxin {ECO:0000313|EMBL:EIL88405.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
peroxiredoxin
|
|
scnpilot_solids2_trim150_scaffold_339_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25118..26722
|
Alkyl hydroperoxide reductase, F subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NLR8_9GAMM
alkyl hydroperoxide reductase, F subunit
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:AGG88686.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_339_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26823..27806)
|
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Malate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW1_9GAMM
malate dehydrogenase
|
|
scnpilot_solids2_trim150_scaffold_339_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27925..29124)
|
Class I and II aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW55_9GAMM
Class I and II aminotransferase {ECO:0000313|EMBL:EIL91446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate/tyrosine/aromatic aminotransferase
|
|
scnpilot_solids2_trim150_scaffold_339_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29288..29701)
|
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WV99_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_339_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29902..30411)
|
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW58_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
|
|
scnpilot_solids2_trim150_scaffold_339_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(30632..31873)
|
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT9_GEMAT
rbh
Peptidase M28 {ECO:0000313|EMBL:AHG92473.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_339_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32020..32505)
|
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cytosine/adenosine deaminase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDP8_9GAMM
cytosine/adenosine deaminase
|
|
scnpilot_solids2_trim150_scaffold_339_29
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32661..33134)
|
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F82558
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AHG65212.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
AsnC family transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_339_30
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33253..34506
|
N-carbamoyl-l-amino acid amidohydrolase (EC:3.5.1.87)
rbh
Allantoate amidohydrolase n=1 Tax=Pseudomonas putida CSV86 RepID=L1LYW6_PSEPU
rbh
Allantoate amidohydrolase {ECO:0000313|EMBL:KJA11820.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
|