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scnpilot_solids2_trim150_scaffold_375

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_375_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80..703
DNA (624bp) protein (208aa)
16S rRNA m(7)G-527 methyltransferase; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH87_NIAKG
scnpilot_solids2_trim150_scaffold_375_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(990..1874)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003680AEF
Acyl transferase {ECO:0000313|EMBL:AHF15564.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_375_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2040..2489
DNA (450bp) protein (150aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_375_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2492..3340
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91450.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_375_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3379..4482
DNA (1104bp) protein (368aa)
Cellulase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY3_NIAKG
Peptidase M42 {ECO:0000313|EMBL:KIC91451.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
cellulase
scnpilot_solids2_trim150_scaffold_375_6
unknown

Not on your lists

4499..4711
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_375_7
RHI_TM6_32_22, TM6, Bacteria

Not on your lists

4659..5108
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4I668_MICAE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_TM6_32_22_curated
scnpilot_solids2_trim150_scaffold_375_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5109..6122
DNA (1014bp) protein (338aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
biotin synthase; K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY7_NIAKG rbh
scnpilot_solids2_trim150_scaffold_375_9
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6163..7029)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036CD8AB
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75436.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_375_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7257..8138)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F36F6 rbh
SMP-30/gluconolaconase/LRE domain-containing protein rbh
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ACT96446.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_375_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8234..9805)
DNA (1572bp) protein (524aa)
SSS sodium solute transporter superfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT83_DYAFD rbh
SSS sodium solute transporter superfamily protein rbh
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:ACT96447.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_375_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9813..11201)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT84_DYAFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT96448.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_375_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11224..11991)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT85_DYAFD rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT96449.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_375_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12008..13186)
DNA (1179bp) protein (393aa)
Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein {ECO:0000313|EMBL:EFK56068.1}; EC=4.2.1.6 {ECO:0000313|EMBL:EFK56068.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6] rbh
Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2FVJ2_9SPHI rbh
scnpilot_solids2_trim150_scaffold_375_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13193..14530)
DNA (1338bp) protein (446aa)
Aminotransferase class-III n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT87_DYAFD rbh
class III aminotransferase rbh
Aminotransferase class-III {ECO:0000313|EMBL:ACT96451.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_375_16
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14603..15832)
DNA (1230bp) protein (410aa)
Oxidoreductase domain protein id=2057708 bin=GWA2_Bacteroidetes_A19_40_15 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
oxidoreductase domain-containing protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_375_17
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(15874..18645)
DNA (2772bp) protein (924aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036EA302 rbh
Tax=CG_Arma_01
scnpilot_solids2_trim150_scaffold_375_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18752..20530)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI0003689505 rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD55464.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
RagB/SusD domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_375_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20554..23730)
DNA (3177bp) protein (1059aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT90_DYAFD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT96454.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
TonB-dependent receptor plug rbh
scnpilot_solids2_trim150_scaffold_375_20
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24996..25859)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037BFB37
Uncharacterized protein {ECO:0000313|EMBL:EZH71673.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
scnpilot_solids2_trim150_scaffold_375_21
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26461..27162
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L0L4_ZOBGA rbh
ATP-binding domain-containing protein {ECO:0000313|EMBL:KEY18059.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_375_22
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27220..27570
DNA (351bp) protein (117aa)
Acetyltransferase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SNL1_9FLAO
Acetyltransferase {ECO:0000313|EMBL:EJL67067.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
Transcriptional repressor of sporulation
scnpilot_solids2_trim150_scaffold_375_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27678..30977)
DNA (3300bp) protein (1100aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000366F0E7
NHL repeat containing protein {ECO:0000313|EMBL:AEW01640.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_375_24
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31280..31537
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037CE3C6
Uncharacterized protein {ECO:0000313|EMBL:EMS34784.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
scnpilot_solids2_trim150_scaffold_375_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31751..32764
DNA (1014bp) protein (338aa)
Phosphoesterase RecJ domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG1_NIAKG
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:AEV98371.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_375_26
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32784..33836
DNA (1053bp) protein (351aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEG2_NIAKG
FKBP-type peptidylprolyl isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
scnpilot_solids2_trim150_scaffold_375_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34026..34445)
DNA (420bp) protein (140aa)
Sporulation domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM40_9SPHI
Sporulation protein {ECO:0000313|EMBL:AHF14524.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
sporulation domain-containing protein
scnpilot_solids2_trim150_scaffold_375_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34602..35273)
DNA (672bp) protein (224aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPJ3_9SPHI rbh
scnpilot_solids2_trim150_scaffold_375_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35410..35988
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEA20
Uncharacterized protein {ECO:0000313|EMBL:KIC96058.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_375_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

36021..36818
DNA (798bp) protein (266aa)
beta-lactamase n=1 Tax=Niabella aurantiaca RepID=UPI00036B70C9
Beta-lactamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 35 in total

View Taxonomy