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scnpilot_solids2_trim150_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_391_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH87620.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
scnpilot_solids2_trim150_scaffold_391_2
unknown

Not on your lists

comp(153..380)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377..886)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FF46_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX70659.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
scnpilot_solids2_trim150_scaffold_391_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

977..1849
DNA (873bp) protein (291aa)
xdhB; xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUU1_AZOS1
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:KFC65773.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
scnpilot_solids2_trim150_scaffold_391_5
unknown

Not on your lists

1920..2138
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_6
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2499..4562
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDZ5_XANP2 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKI01763.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_391_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4568..5467
DNA (900bp) protein (300aa)
OmpA/MotB domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDZ6_XANP2
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ABS66239.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids2_trim150_scaffold_391_8
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5961..6860
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDZ7_XANP2
EH_Signature domain {ECO:0000313|EMBL:AKI01765.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_391_9
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6860..9865
DNA (3006bp) protein (1002aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000367BB1C rbh
DNA/RNA helicase, superfamily II, SNF2 family {ECO:0000313|EMBL:AKI01766.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_391_10
unknown

Not on your lists

comp(9791..10393)
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_391_trna_2
unknown

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comp(10090..10182)
DNA (93bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_391_11
bacterium YEK0313, Bacteria

Not on your lists


10429..11079
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003811E1F
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
scnpilot_solids2_trim150_scaffold_391_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11211..11480
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Xanthobacteraceae RepID=UPI0003602AF2
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_391_13
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11668..12321
DNA (654bp) protein (218aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTD4_9RHIZ
GCN5 family acetyltransferase {ECO:0000313|EMBL:KFG67704.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_391_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12571..13605
DNA (1035bp) protein (345aa)
GTPase Obg n=1 Tax=Rhodovulum sp. PH10 RepID=J6LK47_9RHOB rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
small GTP-binding protein domain-containing protein; K03979 GTP-binding protein rbh
scnpilot_solids2_trim150_scaffold_391_15
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13602..14735
DNA (1134bp) protein (378aa)
gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11]
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
glutamate 5-kinase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EB542D
scnpilot_solids2_trim150_scaffold_391_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14732..16009
DNA (1278bp) protein (426aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
gamma-glutamyl phosphate reductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000312CCC0 rbh
scnpilot_solids2_trim150_scaffold_391_17
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16078..16680
DNA (603bp) protein (201aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / D
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CE517
scnpilot_solids2_trim150_scaffold_391_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16764..17201
DNA (438bp) protein (146aa)
Ribosomal silencing factor RsfS n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTC8_9RHIZ
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
iojap family protein; K09710 ribosome-associated protein
scnpilot_solids2_trim150_scaffold_391_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17202..17681
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP82_RHITR
ribosomal RNA large subunit methyltransferase H
scnpilot_solids2_trim150_scaffold_391_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17761..19140
DNA (1380bp) protein (460aa)
Membrane-bound metallopeptidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTC6_9RHIZ rbh
Membrane-bound metallopeptidase {ECO:0000313|EMBL:EIM27218.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
peptidase M23 rbh
scnpilot_solids2_trim150_scaffold_391_21
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19140..20525
DNA (1386bp) protein (462aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
peptidase S41 n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034D558C rbh
Prc protein {ECO:0000313|EMBL:BAQ47432.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
scnpilot_solids2_trim150_scaffold_391_22
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20618..21826
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UP26_METS4 rbh
hypothetical protein; K09798 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACA18573.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids2_trim150_scaffold_391_23
bacterium YEK0313, Bacteria

Not on your lists

21891..22394
DNA (504bp) protein (168aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
(di)nucleoside polyphosphate hydrolase (EC:3.6.1.-); K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
RNA pyrophosphohydrolase n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KGB4_METEX
scnpilot_solids2_trim150_scaffold_391_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22432..23022
DNA (591bp) protein (197aa)
membrane protein n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003B64975
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL73128.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
scnpilot_solids2_trim150_scaffold_391_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23283..23942
DNA (660bp) protein (220aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CF3_MESSB
Transcriptional regulator {ECO:0000313|EMBL:KFC72883.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_391_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24053..25051
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED223B rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC72882.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP dicarboxylate transporter subunit DctP
scnpilot_solids2_trim150_scaffold_391_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25062..25589
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CCB24
TRAP transporter, DctM subunit {ECO:0000313|EMBL:KFC72881.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
C4-dicarboxylate transport system permease small protein
scnpilot_solids2_trim150_scaffold_391_28
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25586..26857
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F372C5 rbh
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:KFC72880.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP dicarboxylate transporter subunit DctM
scnpilot_solids2_trim150_scaffold_391_29
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26913..28079
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLQ6_9PROT rbh
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:EDP66136.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
mandelate racemase/muconate lactonizing protein rbh
Displaying items 1-30 of 53 in total

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