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scnpilot_solids2_trim150_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_397_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..923
DNA (921bp) protein (307aa)
L-threonine ammonia-lyase; K01754 threonine dehydratase [EC:4.3.1.19]
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
threonine dehydratase n=1 Tax=Segetibacter koreensis RepID=UPI00036C2B33
scnpilot_solids2_trim150_scaffold_397_2
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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975..3542
DNA (2568bp) protein (856aa)
40-residue YVTN family beta-propeller repeat protein id=4567658 bin=GWC2_Bacteroidetes_40_22 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes rbh
Phosphoesterase family protein rbh
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids2_trim150_scaffold_397_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3640..5100
DNA (1461bp) protein (487aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit n=1 Tax=Segetibacter koreensis RepID=UPI000381566D
scnpilot_solids2_trim150_scaffold_397_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5173..5769
DNA (597bp) protein (199aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] rbh
3-isopropylmalate dehydratase, small subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NJT7_9SPHI rbh
scnpilot_solids2_trim150_scaffold_397_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5791..7314
DNA (1524bp) protein (508aa)
(R)-citramalate synthase; K09011 D-citramalate synthase [EC:2.3.1.182] rbh
(R)-citramalate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T700_NIAKG rbh
2-isopropylmalate synthase {ECO:0000313|EMBL:KIC90606.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_397_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7447..8520
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] rbh
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-isopropylmalate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T702_NIAKG rbh
scnpilot_solids2_trim150_scaffold_397_7
unknown

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comp(8569..8961)
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_8
unknown

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comp(8969..9178)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9249..9971
DNA (723bp) protein (241aa)
Protein involved in gliding motility GldF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJW8_NIAKG
gliding motility protein GldF
Protein involved in gliding motility GldF {ECO:0000313|EMBL:AEW01866.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_397_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9986..11704
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C0B10
Gliding motility protein GldG {ECO:0000313|EMBL:KIC95257.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
gliding motility protein GldG
scnpilot_solids2_trim150_scaffold_397_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11810..12742
DNA (933bp) protein (311aa)
tellurium resistance protein TerC n=1 Tax=Niabella aurantiaca RepID=UPI000382A867 rbh
Tellurium resistance protein TerC {ECO:0000313|EMBL:KIC89209.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TerC family integral membrane protein; K05794 tellurite resistance protein TerC rbh
scnpilot_solids2_trim150_scaffold_397_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12967..13362
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NN13_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16173.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_397_13
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13732..14109)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00036BDB61
Uncharacterized protein {ECO:0000313|EMBL:EKB48644.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_397_14
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14151..14333)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI000368706C
Uncharacterized protein {ECO:0000313|EMBL:EOH97913.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
hypothetical protein; K07339 hypothetical protein
scnpilot_solids2_trim150_scaffold_397_15
unknown

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comp(14935..15183)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_16
unknown

Not on your lists

comp(15180..15455)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_17
unknown

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comp(15794..16456)
DNA (663bp) protein (221aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_18
unknown

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comp(16643..17116)
DNA (474bp) protein (158aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_19
unknown

Not on your lists

comp(17113..17310)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_20
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17370..21731)
DNA (4362bp) protein (1454aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MES6_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB60793.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
phage tail protein
scnpilot_solids2_trim150_scaffold_397_21
unknown

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comp(21836..22312)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_22
unknown

Not on your lists

comp(22341..22775)
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_23
unknown

Not on your lists

comp(22896..23189)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_24
unknown

Not on your lists

comp(23340..23714)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_25
unknown

Not on your lists

comp(23893..24840)
DNA (948bp) protein (316aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_26
unknown

Not on your lists

comp(24837..25076)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_27
unknown

Not on your lists

comp(25201..25680)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_28
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25681..26034)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034B0C62
Excisionase {ECO:0000313|EMBL:KJF41657.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
excisionase family DNA binding domain-containing protein
scnpilot_solids2_trim150_scaffold_397_29
unknown

Not on your lists

comp(26103..27194)
DNA (1092bp) protein (364aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_397_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27223..27639)
DNA (417bp) protein (139aa)
Helix-turn-helix domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM09_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17212.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
helix-turn-helix domain-containing protein
Displaying items 1-30 of 49 in total

View Taxonomy