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scnpilot_solids2_trim150_scaffold_403

Search features with annotation key words

Displaying items 31-60 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_403_30
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32447..33862)
DNA (1416bp) protein (472aa)
Outer membrane protein oprM n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7M7_HERAR
Transporter {ECO:0000313|EMBL:KGM51761.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
smeF; outer membrane transport protein involved toxic tolerance
scnpilot_solids2_trim150_scaffold_403_31
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33859..37032)
DNA (3174bp) protein (1058aa)
multidrug transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000314E470 rbh
Multidrug transporter {ECO:0000313|EMBL:KGM54357.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
scnpilot_solids2_trim150_scaffold_403_32
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37045..38220)
DNA (1176bp) protein (392aa)
Hemolysin D {ECO:0000313|EMBL:KGM54358.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
acrA; acridine efflux pump protein; K03585 membrane fusion protein id=12493220 bin=THIO_HI species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acrA; acridine efflux pump protein; K03585 membrane fusion protein
scnpilot_solids2_trim150_scaffold_403_33
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38776..39792
DNA (1017bp) protein (339aa)
hypothetical protein; K03885 NADH dehydrogenase [EC:1.6.99.3]
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00036F5CFA
Putative oxidoreductase {ECO:0000313|EMBL:GAD50390.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_solids2_trim150_scaffold_403_34
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40062..40556
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQI2_9GAMM
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
scnpilot_solids2_trim150_scaffold_403_35
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40591..41043
DNA (453bp) protein (151aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IWP8_9GAMM
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:EGW23107.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_403_36
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41247..42578)
DNA (1332bp) protein (444aa)
Carbohydrate-selective porin OprB n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR2_9GAMM rbh
carbohydrate-selective porin rbh
Carbohydrate-selective porin {ECO:0000313|EMBL:AGG87267.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_37
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42584..43981)
DNA (1398bp) protein (466aa)
Alcohol dehydrogenase cytochrome c subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR3_9GAMM
cytochrome c, mono- and diheme variants family
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:AGG87268.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_38
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43978..45621)
DNA (1644bp) protein (548aa)
Glucose dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR4_9GAMM
choline dehydrogenase-like flavoprotein
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AGG87269.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_39
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45641..46168)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR5_9GAMM
Membrane bound FAD containing D-sorbitol dehydrogenase
Membrane bound FAD containing D-sorbitol dehydrogenase {ECO:0000313|EMBL:AGG87270.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_40
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46458..46850
DNA (393bp) protein (131aa)
DoxX family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS1_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG87275.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_41
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

47171..50386
DNA (3216bp) protein (1072aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP46_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_403_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50626..52341
DNA (1716bp) protein (572aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EIL95049.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIL95049.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA polymerase III subunits gamma and tau n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F8_9GAMM
DNA polymerase III, subunit gamma/tau
scnpilot_solids2_trim150_scaffold_403_43
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52338..52664
DNA (327bp) protein (109aa)
Nucleoid-associated protein UU7_02777 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F9_9GAMM
Nucleoid-associated protein UU7_02777 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding protein, YbaB/EbfC family
scnpilot_solids2_trim150_scaffold_403_44
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52738..53337
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G0_9GAMM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA replication and repair protein RecR
scnpilot_solids2_trim150_scaffold_403_45
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53341..53685
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKI3_9GAMM
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:EIL99974.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids2_trim150_scaffold_403_46
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53774..54415)
DNA (642bp) protein (214aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP00_9GAMM rbh
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL88941.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
starvation-inducible outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_403_47
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54412..56382)
DNA (1971bp) protein (657aa)
Transglutaminase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLP6_9GAMM
transglutaminase-like enzyme, predicted cysteine protease
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:AGG88585.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_48
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56379..57332)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLH1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88586.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_49
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57332..58279)
DNA (948bp) protein (316aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKH9_9GAMM
MoxR-like ATPase {ECO:0000313|EMBL:EIL99970.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
MoxR-like ATPase
scnpilot_solids2_trim150_scaffold_403_50
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58421..59134)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000370986A
Transcriptional regulator transcription regulator protein {ECO:0000313|EMBL:EIL87866.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcriptional regulator transcription regulator protein
scnpilot_solids2_trim150_scaffold_403_51
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59331..60272
DNA (942bp) protein (314aa)
proline racemase (EC:5.1.1.4); K01777 proline racemase [EC:5.1.1.4] rbh
Probable proline racemase protein {ECO:0000313|EMBL:CBA16452.1}; EC=5.1.1.4 {ECO:0000313|EMBL:CBA16452.1};; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
Probable proline racemase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UEC4_XANAP rbh
scnpilot_solids2_trim150_scaffold_403_52
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60269..61363
DNA (1095bp) protein (365aa)
D-amino acid oxidase n=1 Tax=Xanthomonas sacchari RepID=UPI00026309F1
fad dependent oxidoreductase oxidoreductase
Putative fad dependent oxidoreductase oxidoreductase protein {ECO:0000313|EMBL:CBA16451.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids2_trim150_scaffold_403_53
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61360..61608
DNA (249bp) protein (83aa)
sarcosine oxidase alpha subunit; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
Ferredoxin protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VXN5_9GAMM
Ferredoxin protein {ECO:0000313|EMBL:EIL91976.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_403_54
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61601..62884
DNA (1284bp) protein (428aa)
Oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYZ4_9GAMM
Oxidoreductase {ECO:0000313|EMBL:EIL92435.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
oxidoreductase oxidoreductase
scnpilot_solids2_trim150_scaffold_403_55
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

63086..66310
DNA (3225bp) protein (1075aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE9_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL54885.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_403_56
Pseudomonas sp. GM17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66471..68042
DNA (1572bp) protein (524aa)
Amino acid transporter n=1 Tax=Pseudomonas sp. GM17 RepID=J2NB19_9PSED
Amino acid transporter {ECO:0000313|EMBL:EJM15021.1}; Flags: Precursor;; TaxID=1144323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM17.;"
amino acid permease-associated protein
scnpilot_solids2_trim150_scaffold_403_57
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68442..71642
DNA (3201bp) protein (1067aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YN3_SOLUE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO38856.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_403_58
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71779..74751
DNA (2973bp) protein (991aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM
outer membrane cobalamin receptor protein
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_403_59
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74957..76597
DNA (1641bp) protein (547aa)
Carboxypeptidase C (Cathepsin A) n=1 Tax=Rhodanobacter denitrificans RepID=I4WUY4_9GAMM
carboxypeptidase C (cathepsin A)
Carboxypeptidase C (Cathepsin A) {ECO:0000313|EMBL:AGG87343.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 31-60 of 67 in total

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