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scnpilot_solids2_trim150_scaffold_405

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_405_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..366)
DNA (366bp) protein (122aa)
Type II secretory pathway, component PulF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMA9_9GAMM
Type II secretory pathway, component PulF {ECO:0000313|EMBL:EIL88350.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type II secretory pathway, component PulF
scnpilot_solids2_trim150_scaffold_405_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(506..2227)
DNA (1722bp) protein (574aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMB0_9GAMM
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:EIL88351.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
type IV-A pilus assembly ATPase PilB
scnpilot_solids2_trim150_scaffold_405_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3876
DNA (855bp) protein (285aa)
Glycosyl transferase n=2 Tax=Rhodanobacter RepID=M4NEU5_9GAMM
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL97152.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_405_4
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4007..4237
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLY9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR23327.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
SpoVT/AbrB domain-containing protein
scnpilot_solids2_trim150_scaffold_405_5
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4237..4647
DNA (411bp) protein (137aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
Ribonuclease VapC n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLZ0_9GAMM
virulence associated protein VapC; K07062
scnpilot_solids2_trim150_scaffold_405_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4727..5476
DNA (750bp) protein (250aa)
Methyltransferase type 11 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX84_HALNC
Type 11 methyltransferase {ECO:0000313|EMBL:EYR69113.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_405_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5473..6723
DNA (1251bp) protein (417aa)
Group 1 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZW1_9GAMM rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIL92752.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_405_8
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6795..7925)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU81_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20755.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
group 1 glycosyl transferase rbh
scnpilot_solids2_trim150_scaffold_405_9
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7928..8338)
DNA (411bp) protein (137aa)
Twitching motility protein PilT n=1 Tax=Advenella kashmirensis W13003 RepID=V8QLG6_9BURK
PIN domain protein {ECO:0000313|EMBL:EXI66560.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
PilT protein domain-containing protein
scnpilot_solids2_trim150_scaffold_405_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8335..8604)
DNA (270bp) protein (90aa)
Prevent-host-death protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QNB4_9BURK
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
scnpilot_solids2_trim150_scaffold_405_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8911..10002)
DNA (1092bp) protein (364aa)
UDP-galactopyranose mutase (EC:5.4.99.9); K01854 UDP-galactopyranose mutase [EC:5.4.99.9] rbh
UDP-galactopyranose mutase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLZ1_9GAMM
UDP-galactopyranose mutase {ECO:0000313|EMBL:EIL88232.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_405_12
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10076..10507)
DNA (432bp) protein (144aa)
Putative toxin-antitoxin system toxin component, PIN family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQW8_9BURK
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:BAP88392.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_405_13
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10504..10740)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQW9_9BURK
CopG family transcriptional regulator {ECO:0000313|EMBL:KGO98758.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_405_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10868..11545
DNA (678bp) protein (226aa)
Semialdehyde dehydrogenase NAD-binding protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWM4_PSEUU
semialdehyde dehydrogenase NAD - binding protein
Semialdehyde dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADV28573.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids2_trim150_scaffold_405_15
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11610..12770)
DNA (1161bp) protein (387aa)
Tetratricopeptide repeat n=1 Tax=uncultured organism RepID=T1W7R7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KHA76122.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
TPR domain-containing protein
scnpilot_solids2_trim150_scaffold_405_16
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13031..13330
DNA (300bp) protein (100aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T7Z5_CAUSK
addiction module antitoxin; K07473 DNA-damage-inducible protein J
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:ABZ72758.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
scnpilot_solids2_trim150_scaffold_405_17
unknown

Not on your lists

comp(13447..13650)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_405_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13815..14798
DNA (984bp) protein (328aa)
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CEE8_ALCDB rbh
alcohol dehydrogenase rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_405_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14857..15249
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000364E6E8
cupin domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids2_trim150_scaffold_405_20
unknown

Not on your lists

15737..15967
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_405_21
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16331..16855
DNA (525bp) protein (175aa)
Transcriptional regulator, XRE family n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XD19_METSD
Uncharacterized protein {ECO:0000313|EMBL:KHD30556.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_405_22
unknown

Not on your lists

16858..17238
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_405_23
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17213..17854)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B8Q5_PARDP
hypothetical protein; K07133
Uncharacterized protein {ECO:0000313|EMBL:ABL71899.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
scnpilot_solids2_trim150_scaffold_405_24
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18218..18463
DNA (246bp) protein (82aa)
XRE family transcriptional regulator n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT93_PSEUP
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AER57339.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_405_25
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18466..19776
DNA (1311bp) protein (437aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
HipA domain-containing protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT92_PSEUP rbh
HipA domain-containing protein {ECO:0000313|EMBL:AER57338.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_405_26

Not on your lists

20274..20633
DNA (360bp) protein (120aa)
Protein containing DUF172 n=1 Tax=mine drainage metagenome RepID=T1BQE3_9ZZZZ
Protein containing DUF172 {ECO:0000313|EMBL:EQD56215.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_405_27

Not on your lists

20633..21274
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1D0L5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD75975.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_405_28
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21801..22076
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Brenneria sp. EniD312 RepID=G7LN35_9ENTR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
scnpilot_solids2_trim150_scaffold_405_29
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22165..22752)
DNA (588bp) protein (196aa)
Putative uncharacterized protein id=4439580 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_solids2_trim150_scaffold_405_30
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22824..23435)
DNA (612bp) protein (204aa)
Glycosyl transferase family 2 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWR7_NITHN
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADE13798.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Displaying items 1-30 of 53 in total

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