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scnpilot_solids2_trim150_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_406_1
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

comp(266..1228)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003485316
TPR domain protein
Tax=CG_Cyano_01
scnpilot_solids2_trim150_scaffold_406_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

1258..2340
DNA (1083bp) protein (361aa)
NAD-dependent epimerase/dehydratase; K12454 CDP-paratose 2-epimerase [EC:5.1.3.10] rbh
Nucleoside-diphosphate-sugar epimerase id=4349657 bin=GWF2_Lentisphaerae_49_21 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
Tax=GWF2_Lentisphaerae_49_21_curated
scnpilot_solids2_trim150_scaffold_406_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

2560..3054
DNA (495bp) protein (165aa)
hypothetical protein id=14628422 bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
scnpilot_solids2_trim150_scaffold_406_4
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3097..4170
DNA (1074bp) protein (358aa)
NAD-dependent epimerase/dehydratase; K12454 CDP-paratose 2-epimerase [EC:5.1.3.10] rbh
NAD-dependent epimerase n=1 Tax=Patulibacter americanus RepID=UPI0003B73EDB rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CBN54679.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
scnpilot_solids2_trim150_scaffold_406_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4559..5635
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XEB8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPR77409.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
scnpilot_solids2_trim150_scaffold_406_6
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

5893..6387
DNA (495bp) protein (165aa)
Putative uncharacterized protein id=2016506 bin=GWA2__Bacteriovorax-rel_49_15 species=Mycobacterium sp. H4Y genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
Tax=GWA2_Bdellovibrionales_49_15_curated
scnpilot_solids2_trim150_scaffold_406_7

Not on your lists

6418..7185
DNA (768bp) protein (256aa)
glycosyl transferase family protein (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] rbh
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034A9FAB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKK99580.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_406_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7178..8665
DNA (1488bp) protein (496aa)
Polysaccharide biosynthesis protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZS0_CONWI
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ADB53908.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_406_9
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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8772..9389
DNA (618bp) protein (206aa)
Sugar isomerase family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVA5_9PROT
Phosphoheptose isomerase {ECO:0000313|EMBL:CDO59305.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
sugar isomerase family protein
scnpilot_solids2_trim150_scaffold_406_10
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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9386..9967
DNA (582bp) protein (194aa)
HAD-superfamily hydrolase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
histidinol-phosphate phosphatase id=17494840 bin=RBG_16_Aminicenantes_66_30 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_13_Actinobacteria_63_9_curated
scnpilot_solids2_trim150_scaffold_406_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9991..10701
DNA (711bp) protein (237aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2]
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Transaldolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZN9_CONWI
scnpilot_solids2_trim150_scaffold_406_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10706..11686
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
NAD-dependent epimerase/dehydratase id=2211021 bin=GWB2_Proteobacteria_55_19 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EDY19954.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
scnpilot_solids2_trim150_scaffold_406_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

11683..12669
DNA (987bp) protein (329aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] rbh
GHMP kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZR5_OPITP rbh
GHMP kinase {ECO:0000313|EMBL:ACB77251.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
scnpilot_solids2_trim150_scaffold_406_14
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

12666..13697
DNA (1032bp) protein (344aa)
LmbZ n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A17 rbh
putative LmbZ
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
scnpilot_solids2_trim150_scaffold_406_15
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13694..14602
DNA (909bp) protein (303aa)
putative methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-]
Putative generic methyltransferase n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5C4C1_9GAMM
Putative generic methyltransferase {ECO:0000313|EMBL:ESS71603.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
scnpilot_solids2_trim150_scaffold_406_16

Not on your lists

14595..15557
DNA (963bp) protein (321aa)
ykcC; glycosyltransferase (EC:2.-.-.-) rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BR57_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD71383.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids2_trim150_scaffold_406_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15554..16279
DNA (726bp) protein (242aa)
Nucleotidyl transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0U9_9BACT
Nucleotidyl transferase {ECO:0000313|EMBL:EDY19961.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nucleotidyltransferase
scnpilot_solids2_trim150_scaffold_406_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16290..17630
DNA (1341bp) protein (447aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22) rbh
UDP-glucose 6-dehydrogenase id=2211022 bin=GWB2_Proteobacteria_55_19 species=SAR324 cluster bacterium SCGC AAA001-C10 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good rbh
Uncharacterized protein {ECO:0000313|EMBL:EWY42828.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
scnpilot_solids2_trim150_scaffold_406_19
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17627..18502
DNA (876bp) protein (292aa)
(S)-1-phenylethanol dehydrogenase Ped {ECO:0000313|EMBL:ESS71606.1}; EC=1.1.1.311 {ECO:0000313|EMBL:ESS71606.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
(S)-1-phenylethanol dehydrogenase Ped n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5DW90_9GAMM rbh
short-chain alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_406_20
unknown

Not on your lists

18506..20272
DNA (1767bp) protein (589aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_406_21
unknown

Not on your lists

20280..22586
DNA (2307bp) protein (769aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B6418A rbh
scnpilot_solids2_trim150_scaffold_406_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22596..23579
DNA (984bp) protein (328aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Patulibacter medicamentivorans RepID=H0E3L9_9ACTN rbh
scnpilot_solids2_trim150_scaffold_406_23
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23576..27043)
DNA (3468bp) protein (1156aa)
glycosyl transferase family 1 n=1 Tax=Patulibacter americanus RepID=UPI0003B613C2 rbh
Glycosyltransferase {ECO:0000313|EMBL:EON25803.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
glycosyltransferase rbh
scnpilot_solids2_trim150_scaffold_406_24
unknown

Not on your lists

comp(27075..28250)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B42D10 rbh
scnpilot_solids2_trim150_scaffold_406_25
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28625..29344
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZKS6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86870.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
scnpilot_solids2_trim150_scaffold_406_26
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(29347..31023)
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI0003638FBA
Glycosyltransferase {ECO:0000313|EMBL:KIY11078.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
family 2 glycosyl transferase rbh
scnpilot_solids2_trim150_scaffold_406_27
unknown

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comp(31028..31294)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_406_28
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(31315..32175)
DNA (861bp) protein (287aa)
Rhamnose-containing polysacharide translocation permease n=1 Tax=Patulibacter medicamentivorans RepID=H0E5S6_9ACTN
ABC transporter; K01992 ABC-2 type transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_406_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(32172..33506)
DNA (1335bp) protein (445aa)
ABC-transporter n=1 Tax=Patulibacter medicamentivorans RepID=H0E5S7_9ACTN rbh
ABC-transporter {ECO:0000313|EMBL:EHN10978.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_406_30
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

33507..34478
DNA (972bp) protein (324aa)
Glycosyl transferase, family 2 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARF3_RUBXD
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABG06025.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Displaying items 1-30 of 37 in total

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