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scnpilot_solids2_trim150_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_415_1
unknown

Not on your lists

715..1245
DNA (531bp) protein (177aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_415_2
GWA2_OP11_35_8_partial, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

1518..2735
DNA (1218bp) protein (406aa)
ClpP class periplasmic serine protease n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y2P8_9FIRM rbh
ClpP class periplasmic serine protease {ECO:0000313|EMBL:KKP86084.1}; TaxID=1618479 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_35_8.;"
Periplasmic serine proteases (ClpP class) rbh
scnpilot_solids2_trim150_scaffold_415_3
unknown

Not on your lists

2743..2958
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_415_4
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3306..4898
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003810D72
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL27495.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_415_5
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4913..7993
DNA (3081bp) protein (1027aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000374DF94 rbh
Probable L-sorbosone dehydrogenase {ECO:0000313|EMBL:EDL56596.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
dehydrogenase
scnpilot_solids2_trim150_scaffold_415_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8338..8877)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NVU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KIC91409.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_415_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9217..11337)
DNA (2121bp) protein (707aa)
phospholipase C (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3] rbh
Phospholipase C, phosphocholine-specific {ECO:0000313|EMBL:ACU04917.1}; EC=3.1.4.3 {ECO:0000313|EMBL:ACU04917.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Phospholipase C, phosphocholine-specific n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0Z0_PEDHD rbh
scnpilot_solids2_trim150_scaffold_415_8
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11431..11952)
DNA (522bp) protein (174aa)
Ribosomal-protein-alanine acetyltransferase id=4161971 bin=GWF2_Bacteroidetes_41_31 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
N-acetyltransferase GCN5
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_solids2_trim150_scaffold_415_9
unknown

Not on your lists

comp(12165..12323)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_415_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12565..14268)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KT81_SOLCM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFD05264.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_415_11
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14610..15968)
DNA (1359bp) protein (453aa)
sodium:proton antiporter n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B785CB rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Na+/H+ antiporter rbh
scnpilot_solids2_trim150_scaffold_415_12
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

16062..17423
DNA (1362bp) protein (454aa)
trpB; tryptophan synthase beta chain; K06001 tryptophan synthase beta chain [EC:4.2.1.20] rbh
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
tryptophan synthase subunit beta n=1 Tax=Rudanella lutea RepID=UPI0003712D11 rbh
scnpilot_solids2_trim150_scaffold_415_13
unknown

Not on your lists

17791..18252
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_415_14
unknown

Not on your lists

18264..18419
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_415_trna_1
unknown

Not on your lists

comp(18502..18575)
DNA (74bp)
transferRNA Pro
scnpilot_solids2_trim150_scaffold_415_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18990..20249
DNA (1260bp) protein (420aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] rbh
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dihydroorotase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ0_NIAKG rbh
scnpilot_solids2_trim150_scaffold_415_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20272..20811
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98884.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_415_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20830..21771
DNA (942bp) protein (314aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ2_NIAKG rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEV98885.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_415_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21792..22928
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B2D97 rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEV98886.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_415_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23167..23847
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR66_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94607.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_415_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23851..24228
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR67_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC94606.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_415_21
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24252..25208
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BS60_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80748.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_415_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25254..25661
DNA (408bp) protein (136aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR73_SOLCM
Cytochrome c, mono-and diheme variants family protein {ECO:0000313|EMBL:KIC94605.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome c, mono- and diheme variants family
scnpilot_solids2_trim150_scaffold_415_23
unknown

Not on your lists

25774..25998
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_415_24
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26024..26959
DNA (936bp) protein (312aa)
Fe-S-cluster-containing hydrogenase subunit n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR70_SOLCM
Fe-S-cluster-containing hydrogenase subunit
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:AFD07276.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_415_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26971..28287
DNA (1317bp) protein (439aa)
Polysulfide reductase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR71_SOLCM rbh
Polysulfide reductase {ECO:0000313|EMBL:KIC94603.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
polysulfide reductase rbh
scnpilot_solids2_trim150_scaffold_415_26
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28268..29155
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR72_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07278.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_415_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29271..30293
DNA (1023bp) protein (341aa)
GHMP kinase; K07031 D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI000378FD05
GHMP kinase {ECO:0000313|EMBL:AEV98887.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_415_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30347..30928
DNA (582bp) protein (194aa)
phosphoheptose isomerase; K03271 D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoheptose isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ5_NIAKG
scnpilot_solids2_trim150_scaffold_415_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30961..31674
DNA (714bp) protein (238aa)
nucleotidyltransferase; K15669 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ6_NIAKG
Nucleotidyl transferase {ECO:0000313|EMBL:AEV98889.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 41 in total

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