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scnpilot_solids2_trim150_scaffold_426

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_426_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..811
DNA (810bp) protein (270aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF6_9GAMM
ABC transporter permease {ECO:0000313|EMBL:EIL90147.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_426_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

823..2037
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90146.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type antimicrobial peptide transport system, permease component
scnpilot_solids2_trim150_scaffold_426_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2034..3437
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKT0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL87821.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ABC-type transport system, involved in lipoprotein release, permease component rbh
scnpilot_solids2_trim150_scaffold_426_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3448..4668
DNA (1221bp) protein (407aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NDN8_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component rbh
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87982.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_426_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4754..5947
DNA (1194bp) protein (398aa)
Hydrolase, alpha/beta fold family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF4_9GAMM rbh
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:EIL90145.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrolase, alpha/beta fold family rbh
scnpilot_solids2_trim150_scaffold_426_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6006..7319
DNA (1314bp) protein (438aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF3_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL90144.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter permease rbh
scnpilot_solids2_trim150_scaffold_426_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7331..8563
DNA (1233bp) protein (411aa)
ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF2_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EIL90143.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter permease rbh
scnpilot_solids2_trim150_scaffold_426_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8625..9944
DNA (1320bp) protein (440aa)
ABC transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF1_9GAMM rbh
ABC transporter {ECO:0000313|EMBL:EIL90142.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter rbh
scnpilot_solids2_trim150_scaffold_426_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9960..11195
DNA (1236bp) protein (412aa)
ABC transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSF0_9GAMM rbh
ABC transporter {ECO:0000313|EMBL:EIL90141.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter rbh
scnpilot_solids2_trim150_scaffold_426_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11281..12627
DNA (1347bp) protein (449aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE9_9GAMM rbh
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIL90140.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains rbh
scnpilot_solids2_trim150_scaffold_426_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12763..13092
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90139.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_426_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13124..14509
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE7_9GAMM rbh
HAMP domain-containing protein,histidine kinase
scnpilot_solids2_trim150_scaffold_426_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14738..15124
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90137.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_426_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15196..16482
DNA (1287bp) protein (429aa)
Outer membrane protein, probably efflux family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE5_9GAMM rbh
Outer membrane protein, probably efflux family protein {ECO:0000313|EMBL:EIL90136.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane protein
scnpilot_solids2_trim150_scaffold_426_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16479..17576
DNA (1098bp) protein (366aa)
Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE4_9GAMM rbh
Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:EIL90135.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_426_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17576..20680
DNA (3105bp) protein (1035aa)
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE3_9GAMM rbh
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:EIL90134.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
heavy metal efflux pump, cobalt-zinc-cadmium
scnpilot_solids2_trim150_scaffold_426_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20781..21731
DNA (951bp) protein (317aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE2_9GAMM rbh
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:EIL90133.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane protease subunit, stomatin/prohibitin rbh
scnpilot_solids2_trim150_scaffold_426_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21742..22188
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90132.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane protein implicated in regulation of membrane protease activity
scnpilot_solids2_trim150_scaffold_426_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22185..23468
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSE0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90131.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_426_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23754..24077)
DNA (324bp) protein (108aa)
DNA-binding protein H-NS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD9_9GAMM
DNA-binding protein H-NS {ECO:0000313|EMBL:EIL90130.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding protein H-NS
scnpilot_solids2_trim150_scaffold_426_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24348..26045)
DNA (1698bp) protein (566aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Proline--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD8_9GAMM rbh
prolyl-tRNA synthetase, family II rbh
scnpilot_solids2_trim150_scaffold_426_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26158..26580)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90128.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_426_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26692..27474
DNA (783bp) protein (261aa)
phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD6_9GAMM rbh
Phosphatidylserine synthase {ECO:0000313|EMBL:EIL90127.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_426_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27471..27962
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90126.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_426_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27965..28456
DNA (492bp) protein (164aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD4_9GAMM rbh
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EIL90125.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal-protein-alanine acetyltransferase
scnpilot_solids2_trim150_scaffold_426_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28530..31454)
DNA (2925bp) protein (975aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Valine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ59_9GAMM
scnpilot_solids2_trim150_scaffold_426_27
unknown

Not on your lists

comp(31615..32178)
DNA (564bp) protein (188aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_426_28
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32316..33002)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Gayadomonas joobiniege RepID=UPI00036E27E7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT78328.1}; TaxID=1004785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii (strain Black Sea 11).;"
scnpilot_solids2_trim150_scaffold_426_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33067..33417)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90123.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_426_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33441..34508)
DNA (1068bp) protein (356aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD1_9GAMM rbh
Displaying items 1-30 of 40 in total

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