ggKbase home page

scnpilot_solids2_trim150_scaffold_433

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_433_1
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2..853
DNA (852bp) protein (284aa)
atpG; F0F1-type ATP synthase, gamma subunit; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] rbh
F0F1 ATP synthase subunit gamma n=1 Tax=Microbacterium barkeri RepID=UPI000300E451 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_433_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

880..2334
DNA (1455bp) protein (485aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
atpD; F0F1-type ATP synthase, beta subunit; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] rbh
ATP synthase subunit beta n=1 Tax=Microbacterium barkeri RepID=UPI0003038BAE rbh
scnpilot_solids2_trim150_scaffold_433_3
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2337..2597
DNA (261bp) protein (87aa)
atpC; F0F1-type ATP synthase, epsilon subunit; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
F0F1 ATP synthase subunit epsilon n=1 Tax=Microbacterium barkeri RepID=UPI0002D5D580
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_433_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2673..3413
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBI6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA04833.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein; K09861 hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_433_5
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3536..4408
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABW1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJQ53152.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
large exoproteins
scnpilot_solids2_trim150_scaffold_433_6
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4496..5479
DNA (984bp) protein (328aa)
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KJL28255.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL28255.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E36001 rbh
oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_433_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5551..6345
DNA (795bp) protein (265aa)
Serine/threonine phosphatase stp {ECO:0000313|EMBL:KJL18390.1}; EC=3.1.3.16 {ECO:0000313|EMBL:KJL18390.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B81F5 rbh
scnpilot_solids2_trim150_scaffold_433_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6395..9088
DNA (2694bp) protein (898aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036B40AA rbh
Cell division protein FtsK {ECO:0000313|EMBL:KDA04834.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
FtsK/SpoIIIE-related protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
scnpilot_solids2_trim150_scaffold_433_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9098..10096)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B51B4 rbh
L-asparaginase II {ECO:0000313|EMBL:KJL28252.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ansA; L-asparaginase II rbh
scnpilot_solids2_trim150_scaffold_433_10
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10167..10652
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000300FC26
OsmC-like protein {ECO:0000313|EMBL:KJL17997.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
redox protein, regulator of disulfide bond formation
scnpilot_solids2_trim150_scaffold_433_11
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10649..11338)
DNA (690bp) protein (230aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI000302ED61
Acyl-phosphate glycerol 3-phosphate acyltransferase {ECO:0000313|EMBL:EYT59557.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids2_trim150_scaffold_433_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11550..12503
DNA (954bp) protein (318aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
FKBP-type peptidyl-prolyl cis-trans isomerase 1; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE95_9MICO
scnpilot_solids2_trim150_scaffold_433_13
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12570..13631
DNA (1062bp) protein (354aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium barkeri RepID=UPI0002D3B391 rbh
scnpilot_solids2_trim150_scaffold_433_14
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13708..13890)
DNA (183bp) protein (61aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramyl peptide synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345D263
scnpilot_solids2_trim150_scaffold_433_15
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13887..15302)
DNA (1416bp) protein (472aa)
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] rbh
UDP-N-acetylmuramyl peptide synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMD4_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_433_16
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15399..16073)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBJ4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA04838.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
nuclear export factor GLE1
scnpilot_solids2_trim150_scaffold_433_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16172..16741)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FD7860
Uncharacterized protein {ECO:0000313|EMBL:KDA04839.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_433_18
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16847..18163
DNA (1317bp) protein (439aa)
membrane-associated Zn-dependent protease 1; K01417 [EC:3.4.24.-] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DB591D rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids2_trim150_scaffold_433_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18292..20169)
DNA (1878bp) protein (626aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:KJL28245.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KJL28245.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
anthranilate/para-aminobenzoate synthase component I; K13063 phenazine biosynthesis protein phzE [EC:2.6.1.86] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030C5B30 rbh
scnpilot_solids2_trim150_scaffold_433_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20441..21583
DNA (1143bp) protein (381aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ispG; hypothetical protein; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000362C636 rbh
scnpilot_solids2_trim150_scaffold_433_21
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21546..22490
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003451C12 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT59544.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
metal-dependent hydrolase; K07050
scnpilot_solids2_trim150_scaffold_433_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22574..22942)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003602AC3
Erythromycin esterase {ECO:0000313|EMBL:KJL30891.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
erythromycin esterase
scnpilot_solids2_trim150_scaffold_433_23
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23005..23979
DNA (975bp) protein (325aa)
aldehyde oxidase n=1 Tax=Promicromonospora sukumoe RepID=UPI00036807A7 rbh
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIP90964.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
aryl-alcohol dehydrogenase like protein rbh
scnpilot_solids2_trim150_scaffold_433_24
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24198..25619)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CD2E6 rbh
Ribonuclease II {ECO:0000313|EMBL:KDA04849.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ribonuclease II rbh
scnpilot_solids2_trim150_scaffold_433_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25698..26468
DNA (771bp) protein (257aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:KJL30889.1}; EC=2.7.8.23 {ECO:0000313|EMBL:KJL30889.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBK4_9MICO rbh
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_433_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26476..28266
DNA (1791bp) protein (597aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
proS; prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
prolyl-tRNA synthetase n=1 Tax=Microbacterium barkeri RepID=UPI0002E1813D rbh
scnpilot_solids2_trim150_scaffold_433_27
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28327..29451
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DC9E65 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK96216.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
MGT family glycosyltransferase
scnpilot_solids2_trim150_scaffold_433_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29464..30498
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPM0_9MICO rbh
LOG family protein ORF6 in fasciation locus {ECO:0000313|EMBL:KJL19424.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Decarboxylase family protein rbh
scnpilot_solids2_trim150_scaffold_433_29
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30609..32663
DNA (2055bp) protein (685aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D99053 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ53131.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K07093 rbh
scnpilot_solids2_trim150_scaffold_433_30
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32806..33795
DNA (990bp) protein (330aa)
transcription elongation factor NusA n=1 Tax=Microbacterium barkeri RepID=UPI0002E79D39 rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
nusA; transcription elongation factor; K02600 N utilization substance protein A rbh
Displaying items 1-30 of 47 in total

View Taxonomy