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scnpilot_solids2_trim150_scaffold_437

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_437_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(210..935)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037D390A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
scnpilot_solids2_trim150_scaffold_437_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(947..2563)
DNA (1617bp) protein (539aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1R8_CONWI rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADB54099.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_437_trna_1
unknown

Not on your lists

2751..2846
DNA (96bp)
transferRNA Glu
scnpilot_solids2_trim150_scaffold_437_3
unknown

Not on your lists

3696..3974
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_437_4

Not on your lists

3980..4297
DNA (318bp) protein (106aa)
Subunit S of type I restriction-modification system n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQ30_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:KKL04559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_437_5
unknown

Not on your lists

4681..4908
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_437_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

4905..6083
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJ14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34776.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tyrosine recombinase XerC subunit; K03733 integrase/recombinase XerC
scnpilot_solids2_trim150_scaffold_437_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6262..6546
DNA (285bp) protein (95aa)
Tax=GWD2_Deltaproteobacteria_55_8_curated
scnpilot_solids2_trim150_scaffold_437_8
unknown

Not on your lists

comp(6735..6971)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_437_9
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7106..8881
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RWP4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA60577.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_437_10

Not on your lists

comp(9150..9407)
DNA (258bp) protein (86aa)
Marine sediment metagenome DNA, contig: S12H4_S22421 {ECO:0000313|EMBL:GAJ20753.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_437_11
unknown

Not on your lists

comp(9362..10333)
DNA (972bp) protein (324aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_437_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10473..11207
DNA (735bp) protein (245aa)
Cytosine-specific methyltransferase {ECO:0000313|EMBL:EZP67430.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EZP67430.1};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
C-5 cytosine-specific family DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
DNA cytosine-5-methyltransferase PliMCI n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T1H9_9XANT rbh
scnpilot_solids2_trim150_scaffold_437_13
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..12277
DNA (1074bp) protein (358aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
C-5 cytosine-specific family DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Cytosine-specific methyltransferase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H760_XANCT rbh
scnpilot_solids2_trim150_scaffold_437_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12280..13620
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P4D1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDZ23927.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_437_15
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13601..14320)
DNA (720bp) protein (240aa)
naeIV; very short patch repair endonuclease NaeI (EC:3.1.-.-); K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
NaeI very short patch repair endonuclease (V.NaeI) {ECO:0000313|EMBL:CEI32466.1}; EC=3.1.-.- {ECO:0000313|EMBL:CEI32466.1};; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
NaeI very short patch repair endonuclease (V.NaeI) n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GI73_PROFC
scnpilot_solids2_trim150_scaffold_437_16
unknown

Not on your lists

14570..14956
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_437_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14993..16333)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CGS8_9BURK rbh
adenylyl cyclase rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scnpilot_solids2_trim150_scaffold_437_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16346..17410)
DNA (1065bp) protein (355aa)
SAM-dependent methyltransferase PhcB n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D494E
CRP/FNR family transcriptional regulator, anaerobic regulatory protein {ECO:0000313|EMBL:KFC70964.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_437_19
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17580..18071
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Mycobacterium avium RepID=T2GRC0_MYCAV
Uncharacterized protein {ECO:0000313|EMBL:KBZ63775.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis TKK-01-0051.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_437_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18200..20350
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE80_CONWI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB53572.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_437_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20363..22285)
DNA (1923bp) protein (641aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE79_CONWI rbh
beta-lactamase rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB53571.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_437_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22351..22704
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Patulibacter americanus RepID=UPI0003B499C6
hypothetical protein; K00389 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50123.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_437_23
unknown

Not on your lists

comp(22867..23451)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_437_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23818..24672)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADN3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40610.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids2_trim150_scaffold_437_25
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24669..25232)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADN2_GEMAT
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
scnpilot_solids2_trim150_scaffold_437_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25361..26296)
DNA (936bp) protein (312aa)
Homocysteine S-methyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8X6_STAND
homocysteine S-methyltransferase
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ADH88681.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_437_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26363..27034)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W797_KINRD
LuxR family two component transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids2_trim150_scaffold_437_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(27031..28227)
DNA (1197bp) protein (399aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003709B9C
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids2_trim150_scaffold_437_29
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28424..29827
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036699F6
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ACU70921.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Displaying items 1-30 of 42 in total

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