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scnpilot_solids2_trim150_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_448_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93..722)
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC44_9GAMM
scnpilot_solids2_trim150_scaffold_448_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(881..1345)
DNA (465bp) protein (155aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC1_9GAMM
membrane protease subunit, stomatin/prohibitin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_448_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1914..2933
DNA (1020bp) protein (340aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC42_9GAMM
LacI family transcriptional regulator {ECO:0000313|EMBL:EIL97033.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_448_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2966..3229
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CD0EA
OmpA-related protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_448_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..3700)
DNA (348bp) protein (116aa)
DNA-binding protein n=1 Tax=Klebsiella oxytoca RepID=UPI0002DA59B8
Uncharacterized protein {ECO:0000313|EMBL:KDE89305.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3697..4233)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NG29_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89905.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_448_7
unknown

Not on your lists

comp(4284..4478)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_448_8
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..5115)
DNA (648bp) protein (216aa)
Bacteriophage protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6LCH4_PSEST
Uncharacterized protein {ECO:0000313|EMBL:CDF82108.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
bacteriophage protein
scnpilot_solids2_trim150_scaffold_448_9
Sinorhizobium phage phiM19, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(5112..5249)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGR48101.1}; TaxID=1357423 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Sinorhizobium phage phiM12.;"
scnpilot_solids2_trim150_scaffold_448_10
unknown

Not on your lists

comp(5246..5521)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_448_11
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5518..6201)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T9X8_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EFF46490.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_12
unknown

Not on your lists

comp(6198..6626)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_448_13
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6631..6915)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis 02-MB-P-10 RepID=S4CAT3_ENTFL
Tax=BJP_IG2102_Desulfovibrionales_64_25
scnpilot_solids2_trim150_scaffold_448_14
Pseudomonas phage JBD25, Caudovirales, Viruses

Not on your lists

comp(6917..7531)
DNA (615bp) protein (205aa)
sulfate transporter n=1 Tax=Pseudomonas aeruginosa RepID=UPI00036C4409
PF11363 family protein {ECO:0000313|EMBL:AFR52212.1}; TaxID=1225792 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Pseudomonas phage JBD25.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..7698)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89893.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_448_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7695..8186)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89893.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_448_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8186..8473)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIG8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89892.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_448_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8457..8840)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQL8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89891.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_448_19
unknown

Not on your lists

comp(8849..9376)
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_448_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9378..10538)
DNA (1161bp) protein (387aa)
Gp08 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA71_9GAMM rbh
Gp08 {ECO:0000313|EMBL:EED41377.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
BcepMu8; putative DNA-binding phage protein rbh
scnpilot_solids2_trim150_scaffold_448_21
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10535..12382)
DNA (1848bp) protein (616aa)
Gp40 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA85_9GAMM
Gp40 {ECO:0000313|EMBL:EED39247.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
BcepMu9; Tn552/IS1604 rve transposase rbh
scnpilot_solids2_trim150_scaffold_448_22
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12386..13267)
DNA (882bp) protein (294aa)
Gp10 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA86_9GAMM
Gp10 {ECO:0000313|EMBL:EED38709.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_23
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13281..13577)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1LU34_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EKX82457.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_24
unknown

Not on your lists

comp(13574..13786)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_448_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13783..13992)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LA88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KDE89323.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_26
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14083..14592
DNA (510bp) protein (170aa)
Putative Transcriptional regulator (Putative DNA-binding phage protein) n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NGL3_RALSL
putative Transcriptional regulator (putative DNA-binding phage protein)
Putative Transcriptional regulator (Putative DNA-binding phage protein) {ECO:0000313|EMBL:CBJ40037.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
scnpilot_solids2_trim150_scaffold_448_27
unknown

Not on your lists

14615..15235
DNA (621bp) protein (207aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_448_28
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15232..15846
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Salmonella enterica I RepID=Q8RLL2_SALEN
Uncharacterized protein {ECO:0000313|EMBL:AAL87015.1}; TaxID=149539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enteritidis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_448_29
unknown

Not on your lists

15843..16133
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00037F99EE
scnpilot_solids2_trim150_scaffold_448_30
Salmonella phage FSLSP088, Chilikevirus, Caudovirales, Viruses

Not on your lists

16306..17016
DNA (711bp) protein (237aa)
Lysis protein A n=2 Tax=unclassified Siphoviridae RepID=S4TMW9_9CAUD
Lysis protein A {ECO:0000313|EMBL:AGF87794.1}; TaxID=1173757 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Chilikevirus.;" source="Salmonella phage FSLSP088.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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