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scnpilot_solids2_trim150_scaffold_450

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_450_1
unknown

Not on your lists

3..116
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_450_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

160..2076
DNA (1917bp) protein (639aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH04_NIAKG
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_450_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2107..2703
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D1906
Methyltransferase {ECO:0000313|EMBL:KIC94682.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
methyltransferase
scnpilot_solids2_trim150_scaffold_450_4
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2711..6190)
DNA (3480bp) protein (1160aa)
Glycosyl transferase n=1 Tax=Flavobacterium sp. CF136 RepID=J2K0R7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA90644.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_450_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6508..7572)
DNA (1065bp) protein (355aa)
Peptide chain release factor 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI7_NIAKG rbh
peptide chain release factor 1 (bRF-1); K02835 peptide chain release factor 1 rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_450_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7770..8501)
DNA (732bp) protein (244aa)
DNA repair protein RecO n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI5_NIAKG
DNA replication and repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_450_7
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(8537..9094)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8MDE2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ELS05665.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_450_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


9143..9910
DNA (768bp) protein (256aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP30_NIAKG
scnpilot_solids2_trim150_scaffold_450_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9954..11762)
DNA (1809bp) protein (603aa)
Xenobiotic-transporting ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL0_9SPHI rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF16799.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
scnpilot_solids2_trim150_scaffold_450_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11922..14846
DNA (2925bp) protein (975aa)
D-lactate dehydrogenase (Cytochrome) {ECO:0000313|EMBL:AEW03019.1}; EC=1.1.2.4 {ECO:0000313|EMBL:AEW03019.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
D-lactate dehydrogenase (Cytochrome) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLE6_NIAKG
D-lactate dehydrogenase; K06911
scnpilot_solids2_trim150_scaffold_450_11
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14866..15312)
DNA (447bp) protein (149aa)
XRE family transcriptional regulator n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C651
XRE family transcriptional regulator {ECO:0000313|EMBL:AHW60648.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_450_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15324..15557)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C652
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42715.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_450_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15813..17354)
DNA (1542bp) protein (514aa)
magnesium chelatase n=1 Tax=Segetibacter koreensis RepID=UPI00036D37FE rbh
Magnesium chelatase {ECO:0000313|EMBL:AHF16798.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
scnpilot_solids2_trim150_scaffold_450_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17383..18522)
DNA (1140bp) protein (380aa)
ABC-2 type transporter n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT1_DYAFD rbh
ABC transporter permease {ECO:0000313|EMBL:ETZ21989.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ABC transporter; K09686 antibiotic transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_450_15
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18519..19625)
DNA (1107bp) protein (369aa)
ABC-2 type transporter n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWT0_DYAFD rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:ETZ21988.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
ABC transporter; K09686 antibiotic transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_450_16
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19644..19871
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BVA8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ01773.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_450_17
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19855..20322
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D64E3
Uncharacterized protein {ECO:0000313|EMBL:KIA96435.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_450_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(20335..21072)
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=2 Tax=Bacteroidetes RepID=D7VT60_9SPHI rbh
sulfate-transporting ATPase; K01990 ABC-2 type transport system ATP-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_450_19
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21073..21984)
DNA (912bp) protein (304aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VWS8_DYAFD rbh
ATPase {ECO:0000313|EMBL:KIF30746.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
ABC transporter rbh
scnpilot_solids2_trim150_scaffold_450_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21997..22959)
DNA (963bp) protein (321aa)
membrane protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000381B4E0 rbh
hypothetical protein; K01993 HlyD family secretion protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT96827.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_450_21
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(23013..24284)
DNA (1272bp) protein (424aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI0003627422 rbh
Transporter {ECO:0000313|EMBL:KIF30744.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
outer membrane efflux protein rbh
scnpilot_solids2_trim150_scaffold_450_22
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24319..24930)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPG8_9SPHI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EOR93601.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_450_23
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25603..26994)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SJA0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU26332.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
alkyl hydroperoxide reductase rbh
scnpilot_solids2_trim150_scaffold_450_24
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27214..28446)
DNA (1233bp) protein (411aa)
FAD dependent oxidoreductase; K15736 L-2-hydroxyglutarate oxidase [EC:1.1.3.-]
FAD dependent oxidoreductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIN1_FLUTR
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEA45993.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_450_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28608..28895)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS9_NIAKG
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein; K09888 cell division protein ZapA
scnpilot_solids2_trim150_scaffold_450_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28898..29188)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003603E0F
Uncharacterized protein {ECO:0000313|EMBL:KIC92841.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_450_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29181..31634)
DNA (2454bp) protein (818aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372C313
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_450_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32053..33612
DNA (1560bp) protein (520aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Primary replicative DNA helicase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS4_NIAKG
Replicative DNA helicase {ECO:0000313|EMBL:GAO45004.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_450_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33653..34348
DNA (696bp) protein (232aa)
Ribosomal RNA small subunit methyltransferase E; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F862D
scnpilot_solids2_trim150_scaffold_450_30
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34464..35162)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niabella soli DSM 19437 RepID=H1NSK4_9SPHI
Transcriptional regulator {ECO:0000313|EMBL:KIC92452.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
two component transcriptional regulator, winged helix family
Displaying items 1-30 of 33 in total

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