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scnpilot_solids2_trim150_scaffold_452

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_452_1
unknown

Not on your lists

1..138
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_452_2
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(250..2121)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZZ34_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EON79362.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
heparinase II/III family protein rbh
scnpilot_solids2_trim150_scaffold_452_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2298..2648
DNA (351bp) protein (117aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) id=4913349 bin=GWA2_Ignavibacteria_55_11 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
pectin degradation protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
scnpilot_solids2_trim150_scaffold_452_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2710..3909)
DNA (1200bp) protein (400aa)
Glycosyl hydrolase family 88 n=1 Tax=Niabella soli DSM 19437 RepID=H1NS30_9SPHI rbh
Glucuronyl hydrolase {ECO:0000313|EMBL:AHF15523.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glycosyl hydrolase family protein rbh
scnpilot_solids2_trim150_scaffold_452_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3944..5119)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG05_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW01608.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_452_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5310..6842)
DNA (1533bp) protein (511aa)
Putative uncharacterized protein id=4324557 bin=GWA2_Bacteroidetes_42_15 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_452_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6901..9138)
DNA (2238bp) protein (746aa)
Uncharacterized protein id=4145067 bin=GWF2_Bacteroidetes_42_66 species=Parabacteroides goldsteinii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
polysaccharide lyase 8 rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_452_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9176..11047)
DNA (1872bp) protein (624aa)
Heparinase II/III-like protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JYI6_CLOPA rbh
Heparinase II/III-like protein rbh
Heparinase II/III-like protein {ECO:0000313|EMBL:AGK95892.1}; Flags: Precursor;; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
scnpilot_solids2_trim150_scaffold_452_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11455..12429)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=4483424 bin=GWC2_Bacteroidetes_46_850 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes rbh
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_452_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12508..14274)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DEC1B rbh
RagB/SusD domain-containing protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_452_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14294..17329)
DNA (3036bp) protein (1012aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036528CB rbh
TonB-dependent receptor plug rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_452_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17361..19154)
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382A6AA rbh
RagB/SusD domain-containing protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_452_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19167..22385)
DNA (3219bp) protein (1073aa)
Putative uncharacterized protein id=4483412 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes rbh
TonB-dependent receptor plug rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_452_14
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23226..24482)
DNA (1257bp) protein (419aa)
Sulfatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5I4_9SPHI rbh
Sulfatase {ECO:0000313|EMBL:KFC60254.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
sulfatase rbh
scnpilot_solids2_trim150_scaffold_452_15
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24810..25004
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K3N5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDN75636.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
scnpilot_solids2_trim150_scaffold_452_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25502..26530
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEW2_NIAKG rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEW01550.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_452_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26715..28634)
DNA (1920bp) protein (640aa)
molecular chaperone DnaK n=1 Tax=Segetibacter koreensis RepID=UPI000364C4CA rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chaperone protein dnaK; K04043 molecular chaperone DnaK
scnpilot_solids2_trim150_scaffold_452_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28755..29342)
DNA (588bp) protein (196aa)
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dephospho-CoA kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG0_NIAKG
scnpilot_solids2_trim150_scaffold_452_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29447..29794)
DNA (348bp) protein (116aa)
Preprotein translocase, YajC subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG1_NIAKG
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AEV97384.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_452_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29832..30266)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAL5_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52635.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_452_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30290..31189)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361EE17
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NusB antitermination factor; K03625 N utilization substance protein B
scnpilot_solids2_trim150_scaffold_452_22
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31402..31761
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B71495
Uncharacterized protein {ECO:0000313|EMBL:KGO91669.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
scnpilot_solids2_trim150_scaffold_452_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31865..33397
DNA (1533bp) protein (511aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9W0_NIAKG
scnpilot_solids2_trim150_scaffold_452_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33478..34656
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ18_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64256.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_452_25
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34874..35803
DNA (930bp) protein (310aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
malate dehydrogenase n=1 Tax=Pedobacter agri RepID=UPI00029A4B2A rbh
malate dehydrogenase
scnpilot_solids2_trim150_scaffold_452_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36010..36999)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037780EF rbh
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:CCH55805.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
inosine/uridine-preferring nucleoside hydrolase rbh
scnpilot_solids2_trim150_scaffold_452_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37076..37861)
DNA (786bp) protein (262aa)
amidohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00036FCFE2 rbh
Amidohydrolase {ECO:0000313|EMBL:AHF14516.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase 2
scnpilot_solids2_trim150_scaffold_452_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37851..38786)
DNA (936bp) protein (312aa)
Amidohydrolase 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB6_9SPHI rbh
Amidohydrolase {ECO:0000313|EMBL:AHF14515.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase; K07045
scnpilot_solids2_trim150_scaffold_452_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(38852..39745)
DNA (894bp) protein (298aa)
Nicotinamidase-like amidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQM2_SINAD rbh
nicotinamidase-like amidase rbh
Nicotinamidase-like amidase {ECO:0000313|EMBL:AGA31258.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 29 items

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