name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_466_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..193
|
single-stranded DNA-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380D05B
smpB; SsrA-binding protein; K03664 SsrA-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_solids2_trim150_scaffold_466_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
320..493
|
hypothetical protein id=12498565 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_solids2_trim150_scaffold_466_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
720..1766
|
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-]
tRNA 2-selenouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FA849
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1896..2330)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D3296
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_solids2_trim150_scaffold_466_5
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2327..3205)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DDA1C
rbh
Peroxidase {ECO:0000313|EMBL:ETM63585.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
Dyp-type peroxidase family protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3256..5397)
|
GTP pyrophosphokinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7756
rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
scnpilot_solids2_trim150_scaffold_466_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5390..7735)
|
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=12495426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC
rbh
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_solids2_trim150_scaffold_466_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7748..8428)
|
lipoprotein releasing system, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
rbh
ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000374397D
rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
scnpilot_solids2_trim150_scaffold_466_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8421..9665)
|
cell division protein FtsX n=1 Tax=Thiobacillus denitrificans RepID=UPI000381F2A7
rbh
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9710..10138)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F1431
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10170..11168
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375FF67
rbh
hypothetical protein
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11176..12507)
|
ribosomal protein S12 methylthiotransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003779D5F
rbh
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12534..12758
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CF555
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12690..13466)
|
zinc/iron permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000363172F
rbh
ZIP Zinc transporter
rbh
ZIP Zinc transporter {ECO:0000313|EMBL:AAZ97718.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
scnpilot_solids2_trim150_scaffold_466_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13628..13900)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E26E5
competence protein ComEA; K02237 competence protein ComEA
Tax=GWE1_Thiobacillus_62_9_curated
|
|
scnpilot_solids2_trim150_scaffold_466_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14344..14589)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RJG8_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KIZ37571.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_466_17
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14586..15860)
|
Type IV secretion system protein VirB10 n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2XBY0_DELAC
rbh
Conjugative transfer protein TrbI {ECO:0000313|EMBL:BAP44846.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
conjugation TrbI family protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_18
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15863..16855)
|
P-type conjugative transfer protein TrbG n=2 Tax=Proteobacteria RepID=K1JAD8_AERHY
rbh
p-type conjugative transfer protein trbg {ECO:0000313|EMBL:BAP44845.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
P-type conjugative transfer protein TrbG
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_19
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16852..17556)
|
Conjugal transfer protein TrbF n=3 Tax=Proteobacteria RepID=M4WUI8_PSEDE
rbh
conjugal transfer protein TrbF
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB27232.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
|
|
scnpilot_solids2_trim150_scaffold_466_20
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17569..18954)
|
P-type conjugative transfer protein TrbL n=2 Tax=Gammaproteobacteria RepID=K1JKZ1_AERHY
rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KGM52054.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_21
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18951..19271)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RJG4_PSEAI
Lipoprotein {ECO:0000313|EMBL:BAP44842.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
putative lipoprotein
|
|
scnpilot_solids2_trim150_scaffold_466_22
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19284..20009)
|
conjugal transfer protein TrbJ n=1 Tax=Pseudomonas alcaliphila RepID=UPI0002F37B98
rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EWC39973.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri KOS6.;"
trbJ; conjugal transfer protein TrbJ
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_23
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20006..22459)
|
Conjugal transfer ATPase TrbE n=5 Tax=Pseudomonas aeruginosa RepID=U8D3Q7_PSEAI
rbh
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AIJ47718.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
CagE, TrbE, VirB component of type IV transporter system, conserved region; K03199 type IV secretion system protein VirB4
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_24
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22475..22747)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RHT4_PSEAI
putative conjugal transfer TrbD transmembrane protein; K03198 type IV secretion system protein VirB3
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KEH08426.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
|
|
scnpilot_solids2_trim150_scaffold_466_25
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22744..23127)
|
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RH53_PSEAI
conjugal transfer protein TrbC
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AIJ47716.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
|
|
scnpilot_solids2_trim150_scaffold_466_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23124..24176)
|
P-type conjugative transfer ATPase TrbB n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RJG0_PSEAI
rbh
Conjugal transfer protein TrbB {ECO:0000313|EMBL:ETD47581.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
rbh
|
|
scnpilot_solids2_trim150_scaffold_466_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24173..24637)
|
CopG domain protein DNA-binding domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTS4_DELAS
CopG/DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ABX35338.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
|
|
scnpilot_solids2_trim150_scaffold_466_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24634..26643)
|
TRAG family protein n=2 Tax=Delftia acidovorans RepID=A9BPW7_DELAS
rbh
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:EPD45495.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
|
|
scnpilot_solids2_trim150_scaffold_466_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26880..27158)
|
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDU7_PSEAI
Lipoprotein {ECO:0000313|EMBL:KIZ32687.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_466_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27155..28099)
|
Transcriptional regulator n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RHS7_PSEAI
rbh
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:ETD48023.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
LysR family transcriptional regulator
rbh
|