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scnpilot_solids2_trim150_scaffold_470

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_470_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3..131
DNA (129bp) protein (43aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI00037197C6
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT94190.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_470_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

253..3648
DNA (3396bp) protein (1132aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G1_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD05380.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_470_3
unknown

Not on your lists

3691..4284
DNA (594bp) protein (198aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_470_4
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4393..5229
DNA (837bp) protein (279aa)
BRO family protein id=3899674 bin=GWF2_Bacteroidetes_38_335 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
prophage antirepressor rbh
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_470_5
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5373..6893
DNA (1521bp) protein (507aa)
Gluconokinase {ECO:0000313|EMBL:EOR95508.1}; EC=2.7.1.12 {ECO:0000313|EMBL:EOR95508.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
carbohydrate kinase; K00851 gluconokinase [EC:2.7.1.12] rbh
Gluconokinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUY9_9SPHI rbh
scnpilot_solids2_trim150_scaffold_470_6
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6900..7973)
DNA (1074bp) protein (358aa)
peptidase M19; K01273 membrane dipeptidase [EC:3.4.13.19] rbh
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036166D9 rbh
Peptidase M19 renal dipeptidase {ECO:0000313|EMBL:AKA36555.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
scnpilot_solids2_trim150_scaffold_470_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7986..9101)
DNA (1116bp) protein (372aa)
Alanine racemase domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EWX0_EMTOG rbh
alanine racemase domain protein rbh
Alanine racemase domain protein {ECO:0000313|EMBL:AFK04173.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_470_8
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9132..9599)
DNA (468bp) protein (156aa)
YjgF family translation initiation inhibitor n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NYZ5_9SPHI
RidA {ECO:0000313|EMBL:EPR69701.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
endoribonuclease L-PSP
scnpilot_solids2_trim150_scaffold_470_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9734..11053)
DNA (1320bp) protein (440aa)
Gluconate transporter n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EPT7_RUNSL rbh
gluconate transporter; K06155 Gnt-I system high-affinity gluconate transporter rbh
Gluconate transporter {ECO:0000313|EMBL:AEI50285.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_470_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11158..11676
DNA (519bp) protein (173aa)
putative phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Putative phosphohistidine phosphatase, SixA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W0_NIAKG
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:AEW02317.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_470_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11678..12757)
DNA (1080bp) protein (360aa)
peptide transporter n=1 Tax=Niabella aurantiaca RepID=UPI000371DC78 rbh
ABC transporter; K02034 peptide/nickel transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEW02715.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_470_12
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12897..14777)
DNA (1881bp) protein (627aa)
Divalent metal cation transporter MntH n=1 Tax=Algoriphagus machipongonensis RepID=A3I3B6_9BACT rbh
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
NRAMP family Mn2+/Fe2+ transporter; K03322 manganese transport protein rbh
scnpilot_solids2_trim150_scaffold_470_13
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14968..15630
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370FC94 rbh
DtxR family iron (Metal) dependent repressor {ECO:0000313|EMBL:CDT05854.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
Mn-dependent transcriptional regulator
scnpilot_solids2_trim150_scaffold_470_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15714..16412)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1W8U2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:ETZ22501.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
lycopene cyclase domain-containing protein
scnpilot_solids2_trim150_scaffold_470_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16470..16997)
DNA (528bp) protein (176aa)
fatty acid hydroxylase; K15746 beta-carotene 3-hydroxylase [EC:1.14.13.129]
Fatty acid hydroxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQJ5_NIAKG
Fatty acid hydroxylase {ECO:0000313|EMBL:AEW03242.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_470_16
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(16975..17865)
DNA (891bp) protein (297aa)
Putative DNA-binding protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AT89_CHLCH
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:ABB27786.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
scnpilot_solids2_trim150_scaffold_470_17
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17862..18452)
DNA (591bp) protein (197aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]
Putative isopentenyl-diphosphate delta-isomerase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB9_9SPHI
Contig7, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78687.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
scnpilot_solids2_trim150_scaffold_470_18
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18449..18952)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KEQ28486.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_470_19
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18949..19785)
DNA (837bp) protein (279aa)
phytoene synthase n=1 Tax=Pedobacter agri RepID=UPI00029B102E rbh
Phytoene synthase {ECO:0000313|EMBL:KFF12137.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
squalene/phytoene synthase
scnpilot_solids2_trim150_scaffold_470_20
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19782..21263)
DNA (1482bp) protein (494aa)
phytoene desaturase; K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDB6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ22496.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
scnpilot_solids2_trim150_scaffold_470_21
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21409..22593)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D58A84 rbh
hypothetical protein; K07133 rbh
Uncharacterized protein {ECO:0000313|EMBL:ADZ80928.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_470_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22758..24518
DNA (1761bp) protein (587aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEW03123.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEW03123.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Xenobiotic-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP05_NIAKG
xenobiotic-transporting ATPase; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_solids2_trim150_scaffold_470_23
unknown

Not on your lists

comp(24812..25144)
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_470_24
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25579..26247)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036ECE44
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
MgtC/SapB transporter {ECO:0000313|EMBL:ADY52549.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_470_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26348..27892)
DNA (1545bp) protein (515aa)
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] rbh
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
lysyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00037D62D5 rbh
scnpilot_solids2_trim150_scaffold_470_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28109..28780
DNA (672bp) protein (224aa)
Fatty acid hydroxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE3_NIAKG rbh
fatty acid hydroxylase rbh
Fatty acid hydroxylase {ECO:0000313|EMBL:AEW02789.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_470_27
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28942..30270)
DNA (1329bp) protein (443aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
D-xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] rbh
xylose isomerase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B52B6F rbh
scnpilot_solids2_trim150_scaffold_470_28
unknown

Not on your lists

30492..31160
DNA (669bp) protein (223aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_470_29
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31223..32557)
DNA (1335bp) protein (445aa)
Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GST7_9SPHI
Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM {ECO:0000313|EMBL:EOR94771.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
MATE efflux family protein; K03327 multidrug resistance protein, MATE family
scnpilot_solids2_trim150_scaffold_470_30
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32781..33431)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T711_PALPW
Uncharacterized protein {ECO:0000313|EMBL:GAO43341.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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