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scnpilot_solids2_trim150_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_475_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRN7_9GAMM
scnpilot_solids2_trim150_scaffold_475_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

850..1545
DNA (696bp) protein (232aa)
DNA-binding transcriptional dual regulator Crp n=1 Tax=Rhodanobacter denitrificans RepID=I4WW15_9GAMM
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AGG90455.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1596..2294)
DNA (699bp) protein (233aa)
Phosphoserine phosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW17_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90457.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2309..3103)
DNA (795bp) protein (265aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN66_9GAMM
scnpilot_solids2_trim150_scaffold_475_5
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3236..4285)
DNA (1050bp) protein (350aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
anthranilate phosphoribosyltransferase n=1 Tax=Dyella japonica RepID=UPI0003010B3B
anthranilate phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_475_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4282..4869)
DNA (588bp) protein (196aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN68_9GAMM
glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_475_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5090..5761
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G7H4_RALS8
Uncharacterized protein {ECO:0000313|EMBL:KDE89714.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_475_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5829..6080)
DNA (252bp) protein (84aa)
Plasmid stabilization protein n=1 Tax=Pandoraea sp. RB-44 RepID=V5UDL3_9BURK
Plasmid stabilization protein {ECO:0000313|EMBL:AHB04304.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_475_9
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6107..6379)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FTN2_9XANT
Uncharacterized protein {ECO:0000313|EMBL:ENZ96474.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_475_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6485..7723)
DNA (1239bp) protein (413aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WW27_9GAMM
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EIL89887.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Na+/H+ dicarboxylate symporter
scnpilot_solids2_trim150_scaffold_475_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7927..9633
DNA (1707bp) protein (569aa)
Beta-lactamase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRQ5_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL89896.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
penicillin-binding protein, beta-lactamase class C
scnpilot_solids2_trim150_scaffold_475_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9699..11174)
DNA (1476bp) protein (492aa)
Anthranilate synthase component I {ECO:0000313|EMBL:EIM00936.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EIM00936.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=Rhodanobacter denitrificans RepID=I4WW49_9GAMM
scnpilot_solids2_trim150_scaffold_475_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11267..11830)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WN96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00938.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_475_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11884..12552)
DNA (669bp) protein (223aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHZ3_9GAMM
scnpilot_solids2_trim150_scaffold_475_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12688..13503)
DNA (816bp) protein (272aa)
Protein with DnaJ-like domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WW54_9GAMM
protein with DnaJ-like domain
Protein with DnaJ-like domain {ECO:0000313|EMBL:AGG90500.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13500..13688)
DNA (189bp) protein (63aa)
Cytochrome c553 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y6_9GAMM
Cytochrome c553 {ECO:0000313|EMBL:EIL93477.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553
scnpilot_solids2_trim150_scaffold_475_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13768..14826
DNA (1059bp) protein (353aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Y7_9GAMM
phosphoribosylaminoimidazole-succinocarboxamide synthase
scnpilot_solids2_trim150_scaffold_475_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14826..15158
DNA (333bp) protein (111aa)
Putative mebrane transport protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS7_9GAMM
Putative mebrane transport protein {ECO:0000313|EMBL:EIL89918.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
mebrane transport protein
scnpilot_solids2_trim150_scaffold_475_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15190..15660
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89919.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_475_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15657..16064
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WNA3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_475_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16366..18531)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW60_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90506.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18643..20004)
DNA (1362bp) protein (454aa)
Amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WW61_9GAMM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGG90507.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20072..20995
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLI8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90508.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21176..22231
DNA (1056bp) protein (352aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA polymerase IV n=1 Tax=Rhodanobacter denitrificans RepID=I4WW64_9GAMM
nucleotidyltransferase/DNA polymerase involved in DNA repair
scnpilot_solids2_trim150_scaffold_475_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22269..22895)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW65_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG90512.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_475_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22905..23708)
DNA (804bp) protein (268aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDY4_9GAMM
scnpilot_solids2_trim150_scaffold_475_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23827..25644)
DNA (1818bp) protein (606aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR29_9GAMM
scnpilot_solids2_trim150_scaffold_475_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25669..26721)
DNA (1053bp) protein (351aa)
Mechanosensitive ion channel MscS n=1 Tax=Rhodanobacter sp. 115 RepID=I4WHS3_9GAMM rbh
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EIL99014.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
mechanosensitive ion channel MscS
scnpilot_solids2_trim150_scaffold_475_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26732..28117)
DNA (1386bp) protein (462aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Dihydrolipoamide acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W225_9GAMM
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
scnpilot_solids2_trim150_scaffold_475_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28372..29460)
DNA (1089bp) protein (363aa)
MscS mechanosensitive ion channel n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXG7_9GAMM rbh
MscS mechanosensitive ion channel {ECO:0000313|EMBL:EIL91908.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MscS mechanosensitive ion channel
Displaying items 1-30 of 41 in total

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