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scnpilot_solids2_trim150_scaffold_483

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_483_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..990
DNA (990bp) protein (330aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
nrdB; ribonucleoside-diphosphate reductase subunit beta NrdB (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK87_AFIFE
scnpilot_solids2_trim150_scaffold_483_2
bacterium YEK0313, Bacteria

Not on your lists

comp(1054..2376)
DNA (1323bp) protein (441aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B62601 rbh
Beta-phenylalanine transaminase {ECO:0000313|EMBL:CEJ10236.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_483_3
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2393..3271)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8I9M0_METNO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL55273.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids2_trim150_scaffold_483_4
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..4123)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000309A785
Transcriptional regulator {ECO:0000313|EMBL:KDP84371.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
transcriptional regulator GntR
scnpilot_solids2_trim150_scaffold_483_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4313..5647)
DNA (1335bp) protein (445aa)
mfnA; L-tyrosine decarboxylase MfnA (EC:4.1.1.25) rbh
L-tyrosine decarboxylase MfnA {ECO:0000313|EMBL:AFL50419.1}; EC=4.1.1.25 {ECO:0000313|EMBL:AFL50419.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
L-tyrosine decarboxylase MfnA n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3G3_RHIFR rbh
scnpilot_solids2_trim150_scaffold_483_6
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6104..7075
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D7D4B rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWH00481.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
cationic amino acid ABC transporter, periplasmic binding protein; K09969 general L-amino acid transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_483_7
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7171..8340
DNA (1170bp) protein (390aa)
ABC transporter permease n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U7U842_9BURK
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGP02291.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
amino acid ABC transporter permease; K09970 general L-amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_483_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8342..9457
DNA (1116bp) protein (372aa)
amino acid ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5BF67 rbh
amino acid ABC transporter permease; K09971 general L-amino acid transport system permease protein rbh
Putative amino acid ABC transporter permease protein {ECO:0000313|EMBL:CAP40836.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids2_trim150_scaffold_483_9
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9454..10218
DNA (765bp) protein (255aa)
amino aciid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037ADDE9
Uncharacterized protein {ECO:0000313|EMBL:KEQ19009.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas numazuensis.;"
scnpilot_solids2_trim150_scaffold_483_10
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10262..11194
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6D7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDB02362.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_483_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11220..12461)
DNA (1242bp) protein (414aa)
acetyl-CoA hydrolase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037630BD rbh
acetyl-CoA hydrolase/transferase rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
scnpilot_solids2_trim150_scaffold_483_12
Pseudomonas sp. FGI182, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12483..13679)
DNA (1197bp) protein (399aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
UPI0003D61BA1 related cluster n=1 Tax=unknown RepID=UPI0003D61BA1 rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AHD14638.1}; TaxID=1259844 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FGI182.;"
scnpilot_solids2_trim150_scaffold_483_13
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13722..14642)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CTB6_9BURK rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KAK48774.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
putative oxidoreductase, SDR family rbh
scnpilot_solids2_trim150_scaffold_483_14
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14645..15799)
DNA (1155bp) protein (385aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1); K06446 acyl-CoA dehydrogenase [EC:1.3.99.-]
Putative butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CBJ34934.1}; EC=1.3.99.2 {ECO:0000313|EMBL:CBJ34934.1};; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
Putative butyryl-CoA dehydrogenase n=1 Tax=Ralstonia solanacearum RepID=D8MZZ6_RALSL
scnpilot_solids2_trim150_scaffold_483_15
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15828..16226)
DNA (399bp) protein (133aa)
Putative dehydratase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR97_PUSST
dehydratase
Putative dehydratase {ECO:0000313|EMBL:AEC21987.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_483_16
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16238..16642)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Citreicella sp. 357 RepID=I1AR98_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EIE49019.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 357.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_483_17
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16639..17478)
DNA (840bp) protein (280aa)
Transcriptional regulator, IclR family n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9Q6Z0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KDB01726.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_483_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17587..18843
DNA (1257bp) protein (419aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q470J8_CUPPJ
Uncharacterized protein {ECO:0000313|EMBL:KGJ04909.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
L-carnitine dehydratase/bile acid-inducible protein F
scnpilot_solids2_trim150_scaffold_483_19
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18885..20072
DNA (1188bp) protein (396aa)
Branched chain amino acid ABC transporter periplasmic ligand-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MML8_9BURK rbh
Branched chain amino acid ABC transporter periplasmic ligand-binding protein {ECO:0000313|EMBL:BAO91883.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
branched chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_483_20
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20106..20981
DNA (876bp) protein (292aa)
Branched chain amino acid ABC transporter inner membrane protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MML7_9BURK rbh
branched chain amino acid ABC transporter inner membrane protein; K01997 branched-chain amino acid transport system permease protein rbh
Branched chain amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:BAO91882.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
scnpilot_solids2_trim150_scaffold_483_21
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20974..21900
DNA (927bp) protein (309aa)
Branched chain amino acid ABC transporter inner membrane protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MML6_9BURK rbh
Branched chain amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:BAO91881.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
branched chain amino acid ABC transporter inner membrane protein; K01998 branched-chain amino acid transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_483_22
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21902..22642
DNA (741bp) protein (247aa)
Branched chain amino acid ABC transporter ATPase n=1 Tax=Burkholderia sp. YI23 RepID=G8MML5_9BURK rbh
branched chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein rbh
Branched chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AET94054.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
scnpilot_solids2_trim150_scaffold_483_23
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22632..23354
DNA (723bp) protein (241aa)
Branched chain amino acid ABC transporter ATPase n=1 Tax=Burkholderia sp. YI23 RepID=G8MML4_9BURK
branched chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
Branched chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AET94053.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
scnpilot_solids2_trim150_scaffold_483_24
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23357..25291
DNA (1935bp) protein (645aa)
AMP-dependent synthetase/ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QSK9_RALPI rbh
Acetate--CoA ligase {ECO:0000313|EMBL:KAK48768.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
scnpilot_solids2_trim150_scaffold_483_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25304..26083
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFE5_ALIDK rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEB83877.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_483_26
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26108..26920
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AGW93898.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AGW93898.1};; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QUM5_RALPI
scnpilot_solids2_trim150_scaffold_483_27
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26925..28958
DNA (2034bp) protein (678aa)
2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:EWC59621.1}; EC=1.3.1.34 {ECO:0000313|EMBL:EWC59621.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026288DB rbh
NADH:flavin oxidoreductase rbh
scnpilot_solids2_trim150_scaffold_483_28
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28972..29724
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036D7067
Short-chain dehydrogenase {ECO:0000313|EMBL:KHS10007.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_483_29
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29734..30618
DNA (885bp) protein (295aa)
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 10 (EC:1.1.1.-)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003728018
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KGY16383.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
scnpilot_solids2_trim150_scaffold_483_30
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30981..31892)
DNA (912bp) protein (304aa)
2,3-dimethylmalate lyase (EC:4.1.3.32)
2,3-dimethylmalate lyase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEE9_SPHWW
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EWY41708.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Displaying items 1-30 of 44 in total

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